| Annotation |
|---|
| Description | jgi|Araly1|938412|scaffold_502603.1 |
| Sequence |
TTTGGACAGC AAAATTCAAG GGATGGGATT AACGAATTGT TCCCACGAGG AGTTAATGAG TCGACTCGTT GACTCGGTGA AAGAAATATC TGGGTTTTCA TCTTCAAGGG GTTTTATTGG GAAGATCCAA GGCGATCTTG TTCGTAGGAT CACGCTTCTC AGCCCTTTCT TCGAGGAATT GATAGACGTT AATGTTGAAT TGAAGGAGGA TCAAATTGCA GGGTTTGAGG TTATGAGAAT CGCTCTTGAT TCAAGTCTTG AGCTTTTTCG ATCCGTTCAT GGAGGCAGCA AGCTTTTTCA GATTTTCGAT AGAGATTCTC TTGTGCTGAA GTTCCACAAC ATGACGGTGG AGATAGAAGC AGCGTTAAGT CAAATTCCTT ATGATAAGAT TGAGGTATCA GAGGAAGTCA GAGAACAGGT TCAGCTTCTG CATTTTCAGT TCAAGAGAGC AAAAGAAAGA CGGGAAGAGT ATGATATACA GCTTAGCCAT GATCTAGCCA TGGCAGAGGA TGTAATGGAT CCTGACCCTA ATATCCTCAA AAAACTTTCA CAAGAGCTCC AACTTAGTAC CATTGATGAA CTGAAGAAAG AATCACATGC AATACATGAA TATTTTCTTT CATATGATGG GGATCCTGAT GACTGTTTCG AGAGGATGTC CTCACTTCTT AAAAAGCTGG TAGACTTTGT AACAATGGAA AGTTCAGACC CCGATCCATC CACTGGCAAC AGAATCATTT CGAGACATCG TTCTCCTGTT ATACCAGAGT ATTTTCGGTG TCCGATATCA CTTGAACTGA TGAAAGATCC TGTTATCGTT TCCACTGGAC AGACATATGA AAGATCATCA ATTCAGAAGT GGCTTGATGC TGGTCATAAA ACCTGTCCGA AATCTCAGGA GACACTTTTA CATGCTGGAT TAACCCCTAA TTACGTGTTA AAGAGTCTCA TTGCTCTGTG GTGTGAAAGC AACGGCATTG AGCTACCGCA AAATCAAGGG AGCTGCAGAA CCACAAAAAC AGGAGGAAGC AGCTCTTCAG ATTGTGATCG AACATTTGTC GTTTCCTTGT TAGAGAAATT GGCCAATGGT ACTACCGAAC AGCAAAGAGC TGCAGCTGGA GAATTACGGT TACTAGCCAA GAGGAACGTG GATAACAGAG TTTGTATCGC TGAGGCTGGA GCCATACCAC TGCTTGTAGA GCTTCTGTCC TCACCAGATC CTCGGACTCA AGAACATTCT GTGACGGCTC TTCTCAATCT TTCCATAAAT GAAGGGAACA AAGGAGCCAT TGTTGATGCA GGAGCCATAA CAGATATTGT AGAAGTACTA AAAAACGGAA GCATGGAGGC TAGAGAGAAC GCAGCTGCGA CCCTTTTCAG TTTATCTGTT ATAGATGAAA ACAAAGTGGC GATAGGTGCT GCTGGAGCTA TCCAAGCACT TATAAGCTTG CTTGAGGAAG GAACCCGAAG AGGCAAAAAA GACGCTGCAA CAGCGATTTT CAATTTATGC ATATACCAGG GGAACAAATC AAGGGCGGTT AAAGGCGGTA TTGTTGACCC TCTGACAAGA TTACTAAAAG ATGCAGGTGG CGGAATGGTG GATGAGGCTT TGGCGATTCT GGCAATTCTT TCGACAAACC AAGAAGGGAA AGCAGCGATA GCTGAAGCAG AATCGATCCC AGTTTTGGTT GAGATTATAA GGACAGGGTC ACCAAGGAAC CGAGAAAATG CTGCAGCAAT ACTTTGGTAT CTATGTATTG GGAATATGGA AAGGCTAAAT GTTGCAAGAG AGGTTGGTGC AGATGTGGCC TTGAAGGAAC TTACTGAGAA TGGAACTGAT AGAGCAAAGA GGAAAGCTGC GAGCTTGTTG GAGCTCATTC AGCAAACCGA AGTTGTTGCA GTATCTACTG TTCCATGAAA GCCTCGGTCT TGTGGAATGT TATTT |
| Length | 1945 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 16256787.. 16259288 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54850.1 |
| Description | plant U-box 14 |
| TAIR curator summary | Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. |
| Alias | [ATPUB14][PUB14][plant U-box 14] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg479191 | ubiquitin protein ligase 6 |
| 5.47723 |
Ahg478832 | sequence-specific DNA binding transcription factors |
| 11.8322 |
Ahg495103 | exocyst subunit exo70 family protein F1 |
| 12 |
Ahg488790 | SNARE associated Golgi protein family |
| 12.8452 |
Ahg486932 | RING/U-box superfamily protein |
| 12.9615 |
Ahg472467 | phytochrome-associated protein phosphatase type 2C |
| 13.7477 |
Ahg329104 | dentin sialophosphoprotein-related |
| 23.9583 |
Ahg921163 | BTB/POZ domain-containing protein |
| 24.6171 |
Ahg482876 | Amino acid dehydrogenase family protein |
| 29.3428 |
Ahg486888 | saposin B domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|