Detail



ID : Ahg472646

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472646|fgenesh2_kg.1__2600__AT1G23860.3
Sequence
ATGACGAGGG TTTACGTCGG GAATTTGGAC CCAAGGGTCA CCGAAAGAGA ACTCGAAGAC GAATTCAGAA TCTTCGGCGT TCTTCGCAAT GTTTGGGTAG CTCGTAGGCC TCCTGGCTAC GCTTTCCTCG AGTTCGATGA CGAGAGAGAT GCTTTGGATG CAATTAGGGC ATTGGATCGA AAGAATGGGT GGCGTGTGGA GCTTTCTCAT AAAGATAAAG GTGGTCGTGG AGGCGGTGGT GGTCGTCGTG GCGGTATTGA GGATTCTAAG TGCTATGAGT GCGGTGAACT TGGACATTTT GCTCGGGAGT GTCGCCGTGG TCGAGGCTCT GCGAGGCGTA GAAGCCCTAG TCCTCGTCGT CGTAGGAGTC CAGATTATGG GTATGGACGC AGCTACAGCA GATCCCCTCC TTATCGTGGT TCGCGCCGGG ATTCTCCTCG CCGCAGAGAC TCACCCTATG GTCGACGTTC GCCATATGCC AATGGGTAAG GTGTGAAACT GGACCCTGAA GAGAAAGAAG ATATTAAAAC TTCTATGCTA TGATGCTATA TCTTTTAGGA TAGTTCTACT AGGATTGGTT GTTGAGCATG GTGTTCGTGT TTTATTAGAC AATTGGATTT GGTGAATTCT CCTTCAAGCT GTTTTCCAAC AGCCGTCTTG ACTTATTCTC TTTAACACGC GCTGGCTTGC TGTCTTCACT CAGCGTGCTT GAACCCCTAC ACTTGAGGTC GTTCTTTCGT ATCCATAAAA TATGTTTTGT GTCTTGTTGA ATGCACTTAC CTTATCATAT AATATGTGTG ACATATCTAA AAGGCTCAAC TGTTTCCACT CTTTTTCCCT TGTGAGGTAT GATTTATCGG GGATCTCTCC GCAGCTGCGC TGCATCTTAC TCTCCCCTCA ACTTAGCTTT GCTATGAATC TGCATCGTCA ACTCGACCAT CATCAGCTAG ATTTGCTTGT TACATTGTGT GACTTTTAGA TTGCCCTGCT CTTTACTCAC AACTCTTACC CCAATCTGCA AACCAAGCTT CTAAGGAGAA GGACAAAGCT GTTTCTTCAC CCCGCCCTCT CCCTCGCTCT CAGCTGCTTT ATCACCCCTT GGGTTCTCTG CTCACTTTTG TTTTCGGTCA ACTTTGCACA CATCTGTTGG TGGATCACAC ACTTACATTA AA 
Length1172
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10018951.. 10020861
Download Sequence
A.thaliana
AGI-codeAT1G23860.1
DescriptionRS-containing zinc finger protein 21
TAIR curator summaryEncodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing.
Alias[At-RSZ21][RSZ21][RSZP21][SRZ-21][SRZ21][RS-containing zinc finger protein 21]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg893724
8.30662 Ahg938260 FUS3-complementing gene 1
16.1245 Ahg943011 bromo-adjacent homology (BAH) domain-containing protein
50.2792 Ahg473178 receptor-like kinase in flowers 1
61.6928 Ahg346315 Cyclin/Brf1-like TBP-binding protein
63.4665 Ahg481650 dephospho-CoA kinase family
66.453 Ahg490543 ARM repeat superfamily protein
72.1873 Ahg488180 Protein of unknown function (DUF155)
72.9109 Ahg926773 Transmembrane Fragile-X-F-associated protein
83.6421 Ahg313379 Plasma-membrane choline transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression