Detail



ID : Ahg490543

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490543|fgenesh2_kg.6__3677__AT4G00231.1
Sequence
GTCATCAATG GAAGCTTCTC TACCCGAAGA GGTGCTTCAG CCGCTGCTAC ATGCGTCGGA TTTATCATAC TCTCTAGAAG GTTGCTTGAA GTTTCTTCTA GAGTCTTCCA AGACCGATTC AGGCCGTTCC GATCTCGCTT CCAAGTGTAT CCTTCCGTCG ATCCTCCGTC TTCTTCAGCT TCTTCCTTAC CCATCTTCCC GCCATTATCT AAATCTCTCT CTGAAAGTCC TCCGCAACCT ATGCGCCGGC GAGGTTTCGA ATCAGAACTC TTTCGTCGAT CACGACGGTT CTGTTATCGT CTCCGAGTTG CTTGATTCCG CCATTGCGGA TTTTGAAACT GTTAGGTTCG GATTGCAGGT TCTAGCGAAC GTTGTATTGT TCGGAGAGAA ACGTCAGAGA GATGTGTGGC TCCGCTTTTT CCCGGAGAGG TTCTTATCAA TCGCTAAGAT TAGGAGGCGT GAAACCTGTG ATCCTCTGTG TATGATTTTG TATACGTGCT TTGATGGAAG CTCAGAGATT GCTTCAGCGC TTTGCAGCAG CGAAGGGCTC ACCATCATCG CTGAAACTCT ACGGACTTCA TCTTCCGTTG GGTCTGTGGA GGATTATTGG CTCAAATTAC TGGTTTCGAG AATCTGTGTT GAAGACTATT ACTTCCCCAA GCTCTTCTCC AAGTTATACA AAGTTGCTGA AAATGAGAAA TTTACATCAG AGCAAGCCTT TCTTCTGAGG ATGGTGTCTG ATATTGCAAA TGAGCGGATA GGAAAAGTGG CAATCCCCAA GGATACAGCT TCTTCAATTC TCGGATTATT TAAGCAATCA GTTGACGTTT TCGATTTTGT TTCGGGTGAA AGATCCGAGC TTCCAACGGG TTCAACTATA GTAGACGTGA TGGGCTACTC TCTGGTGATA ATAAGGGATG CTTGCGCTGG AGGAAGCCTT GAAGAACTCA ACAAGGACAA CAAGGATTCC GGTGATACTG TTGAGTTGCT CTTGTCCTCT GGACTAATAG AGCTCCTCCT TGATCTGCTT CGCAAACTTG ATCCTCCAAC AACTATAAAG AAGGCTCTAA ACCAGAGTCC TACTTCTTCT TCTTCATTTA AGCCCTGCCC TTACAGAGGA TTCAGGAGAG ATATTGTGTC GGTGATTGGG AACTGCGCGT ACAGAAGAAA AGAGGTACAA GATGAGATCA GGGAGAGTGA TGGGCTCGTC CTAATGTTGC AGCAGTGTGT GACCGATGAT GAGAACCCAT TCTTGAGAGA ATGGGGCTTG TGGTGTGTGA GAAATTTGCT GGAAGGGAAC CCAGAAAACC AGGAAGTGGT GGCTGAGTTG GAGATTAAAG GCTCTGTTGA TGTGCCTCAA CTCCGTGAAA TTGGTCTCAG AGTTGAAATT GATCCTAAAA CAGCCAGGCC AAAGCTTGTC AACGACACCT GAAGCTTCAT TGCCATAGCT GAT 
Length1453
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23403078.. 23404705
Download Sequence
A.thaliana
AGI-codeAT4G00231.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias[MEE50][maternal effect embryo arrest 50]
Gene coexpression
MR
MR Locus Description
1 Ahg494272 casein kinase II beta chain 1
5.65685 Ahg472130 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
17.3494 Ahg472398 wound-responsive family protein
17.8885 Ahg941057 DNA/RNA polymerases superfamily protein
22.1359 Ahg489715 phosphotyrosyl phosphatase activator (PTPA) family protein
25.3772 Ahg493135 O-fucosyltransferase family protein
27.4955 Ahg494338 O-acetyltransferase family protein
33.1813 Ahg477381 SIN3-like 1
38.6782 Ahg352549 RNI-like superfamily protein
40.8167 Ahg483034 Microsomal signal peptidase 25 kDa subunit (SPC25)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression