Detail



ID : Ahg473005

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473005|fgenesh2_kg.1__2959__AT1G28050.1
Sequence
GATTATTTTG ACAAAGCCCA AAAAAAAAAA AAAAAAAAAA AATCCGAAAT GGAAAACGTG AGTAATGGAT TTGTCATCAT TCATTCTCAC CGTCCTTAAT CTCTGAAAGT TGATTTCGAA TTTTGAGGAA GTTATGGCTA GTTCGAAGAG AGTACCGTGC GATTTCTGCG GCGAGAGAAC GGCGGTTTTG TTTTGTAGAG CCGATACGGC GAAGCTGTGT TTGCCTTGTG ATCAGCACGT GCACACGGCG AATCTCTTGT CGAGGAAGCA CGTGCGATCT CAGATCTGCG ATAATTGTGG CAACGAGCCA GTCTCTGTTC GGTGCTTCAC CGATAATCTC ATTTTGTGTC AGGAGTGTGA TTGGGATGTT CACGGAAGCT GTTCAGTTTC CGATGCTCAT GTTCGATCCG CCGTCGAAGG TTTTTCCGGT TGTCCATCGG CGTTGGAGCT TGCTGCTTTG TGGGGACTTG ATTTGGAACA AGGGAGGAAA GAAGAAGAGA GTCAAGTTCC GATGATGGCG TTGATGATGG AGAATTTTGG GATGCAGTTG GATTCTTGGG TTTCGGGATC TAACGAATTG ATTGTTCCCA GTGATACGAT GTTTAAGAAA CGTGGATCTA GTTGTGGGAG GTATAAGCAG GTGTTGTGTA AACAGCTTGA GGAGTTGCTT AAGAGTGGTG TTGTTGGTGG TGACGATGAA GATGGTGATG GTGATCGTGA CCGTGACTGT GACCGTGAGG GTGATGGAGA TGGAGATGGA GAAGCAGGAG AGGGGCTTAT GGTTCCGGAG ATGTCGGAGA GATTGGAATG GTCAAGAGAT GTTGAGGAGA TCAATGCCGG AGGAGTTAAA CAGCAGCCTT TGCAGTGGAA TGCTACTACT AATCCTAGTG GTGGCCAGAG TTCTCAGATA TGGGATTTTA ACTTGGGACA GTCACGGGGA CCTGAGGACA CTAGTCGAAT AGAAGCTGCA TATGTAACGA AAGGTGCTGC TTCATTCACA ATCAACAACT TTGTTGACCA TATGAATGAA ACTTGTTCCA CTAACGCCAA AGGTGTTAAG GGGATTTGCA AGGATGACTA CAAGCGATCA ACTTCAGGCC AGGTACAATC AACAAAATCT GAGAGCAACA ATCTTCCAAT TACCTTTGGC TCCGAGAAAG GTTCGAACTC CTCCAGTGAC TTGCATTTCA CGGAGCATAT TGCTGGAACT AGTTGTAAGA CCACAAGACT AGTGGCAACT AAGGCTGATC TGGAGCGGCT GGCTCAGAAC AGAGGCAACG CAATGCAGCG TTACAAGGAA AAGAGGAAGA CACGGAGATA TGATAAGACC ATAAGGTATG AATCGAGGAA GGCAAGAGCT GACACTAGGT TGCGTGTCAG AGGCAGATTT GTGAAAGCTA GTGAAGCTCC TTACCCTTAA GTCTCTTCAC ATAGTTTTCC TTTTAGCTAC AAAGTTAGTT ACTTTTTCTA CTTCCACTGC CTGGTAAATG TATAGACGGG TCTTGTTTCA TTTGGCCGCC CTTTTCTGTT TTTTTGCCTT ATCTGGCTCC TTTATGTACC TTGGAATCTT ATCTAGTTGA AAAAGGATTG TAACCTTCTA GAAAGCAATA TTCTGTTGAC TGTATATACT TGTCTATCCA AGCATTTTGA AGTCTC 
Length1656
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11695502.. 11697697
Download Sequence
A.thaliana
AGI-codeAT1G28050.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summary
Alias[BBX13][B-box domain protein 13]
Gene coexpression
MR
MR Locus Description
10 Ahg476192 cyclin-related
12.1655 Ahg481582 calmodulin 5
12.4499 Ahg473207 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
12.8452 Ahg935720 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
12.9615 Ahg944922 Low temperature and salt responsive protein family
13.2665 Ahg942557 isoamylase 3
14.5945 Ahg484447 CCR-like
15.2971 Ahg481034 cold, circadian rhythm, and rna binding 2
18.1108 Ahg493483
24.6982 Ahg358320 leo1-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression