Detail



ID : Ahg473038

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473038|fgenesh2_kg.1__2992__AT1G28290.2
Sequence
AAAAACAAAA CAAAAAATGG GTTTCATTGG TAAGAGTGTA TTAGTGAGTC TCGTAGCACT TTGGTGCTTC ACTTCCTCTG TCTTCACTGA AGAAGTGAAC CATGTGACTC AAACCCCTTC TCTAGCTCCT GCTCCTGCTC CTTACCACCA CGGCCACCAC CACCCACACC CTCCTCATCA CCATCACCCT CACCCTCACC CTCACCCTCA CCCACCGGCC AAATCTCCCG TTAAACCCCC GGTTAAGCCC CCAGTGTCTC CACCAGCCAA ACCCCCGGTT AAGCCCCCAG TTTACCCACC GACCAAAGCC CCGGTTAAGC CCCCAACTAA ACCCCCGGTC AAGCCACCGG TCTCCCCACC AGCTAAACCC CCGGTCAAGC CACCGGTTTA CCCTCCAACC AAAGCTCCAG TTAAGCCCCC AACTAAACCC CCGGTCAAGC CACCAGTTTA CCCTCCAACC AAAGCTCCGG TTAAGCCCCC AACTAAACCC CCGGTCAAGC CACCAGTTTC CCCACCAGCC AAACCTCCGG TTACGCCGCC GGTTTACCCT CCTAAGTTCA ACCGTAGTCT AGTCGCCGTT CGTGGTACGG TTTACTGCAA AAGCTGTAAA TACGCTGCTT TCAACACACT CTTAGGCGCT AAACCCATCG AAGGTGCTAC TGTGAAACTA GTGTGTAAGA GCAAGAAGAA CATAACAGCG GAGACGACGA CAGACAAGAA CGGATACTTC TTGTTGTTGG CTCCTAAGAC GGTGACGAAC TTCGGTTTCA GAGGATGTCG TGTGTATTTG GTGAAATCAA AGGACTACAA ATGCAGCAGA GTCTCAAAGC TCTTCGGTGG AGATGTCGGT GCTGAACTCA AGCCGGAGAG AAGGCCGGGA AAAGGTACGG TGGTCGTCAA CACGCTCACA TACGGTCTCT TTAACGTTGG TCCATTTGCC TTTAACCCGA CTTGCCCCAA ATGAAGATGA TTTGATGCTC TAGTTACATT CTTGATTTCG TCATGTTCAA AAGATTGAGA CTTGAGAGAG TGTGAATTTT AATTAATGTT AGCTAGTCTT TAAGTTAAAT GCTTGTTTAA GTGACGTTGT TTAAGTTTCG TTTGAATAAA AATAGCAGCT TTCAAGAAGA TT 
Length1132
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11829541.. 11831227
Download Sequence
A.thaliana
AGI-codeAT1G28290.1
Descriptionarabinogalactan protein 31
TAIR curator summaryEncodes an atypical arabinogalactan protein that is localized to the plasma membrange. AGP31 is highly expressed in flowers and vascular tissue and is repressed by jasmonic acid. AGP31 may play a role in vascular tissue function during defense and development.
Alias[AGP31][arabinogalactan protein 31]
Gene coexpression
MR
MR Locus Description
2 Ahg481792 Pathogenesis-related thaumatin superfamily protein
6.9282 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
8.12404 Ahg477690 Li-tolerant lipase 1
8.3666 Ahg920750 Pathogenesis-related thaumatin superfamily protein
12.0416 Ahg321364 Leucine-rich repeat protein kinase family protein
12.6886 Ahg358300 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.9615 Ahg494222 Pectin lyase-like superfamily protein
13.7477 Ahg482818 glycerol-3-phosphate acyltransferase 6
14.1421 Ahg351411 HXXXD-type acyl-transferase family protein
14.4222 Ahg470918 syntaxin of plants 111
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression