Detail



ID : Ahg321364

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321364|fgenesh1_pm.C_scaffold_4001421
Sequence
ATGGCTGCTA AACCTCTTCT TCCTCTTCTC CTCCTTCTCC TTCTTCACCT CTCAATCTCC TTTGCTCAAA ACGACACAAA TGCACTCACA CTCTTCCGTC TCCAAACCGA CACACACGGC AACCTCGCCG GAAACTGGAC CGGCTCCGAC GCTTGTTCCT CCTCATGGCA CGGCGTTTCT TGCTCACCAT CTTCACACCG CGTCACCGAA CTCTCTCTCC CTTCCCTCTC CTTACGAGGA CCATTAACCT CTCTCTCCTC CTTAGACCAG CTTCGTCTTC TTGATCTCCA CGATAACAGA CTCAACGGCA CCGTTTCACC ACTCACAAAC TGTACAAACC TCAGACTCGT TTATCTCGCC GGTAACGATC TCTCCGGTGA GATTCCTAAA GAGATCTCTT TTCTTAAACG AATGATACGT CTTGATCTCT CTGATAACAA TATCCGTGGA GTTATACCAA GAGAGATTCT CGGGTTTACC CGGATTTTAA CGATCCGGCT CCAGAACAAT GAGTTAACGG GTCGGATCCC GGATTTTTCT CAGATGAAGT CACTTCTTGA ATTGAATGTT TCGTTCAATG AATTGCACGG AAATGTCTCC GACGGTGTGG TGAAGAAATT TGGAGACTTG AGCTTTTCCG GTAACGAAGG ATTGTGCGGG TCGGATCCTT TACCGGTTTG TACTTTCACA AATGACCCTG AATCTTCAAA CACTGATCAG ATTGTTCCGT CGAATCCTAC GTCGATTCCG CATTCTCCGG TTACCGTCGG AGAACCGGAA ATTCACGGTC ATAGAGGGGT TAAACCGGGA ATAATCGCCG CGGTTATCGG CGGTTGTGTG GCGGTTATTG TTTTAGTATC TTTCGGTTTT GCTTTCTGTT GTGGAAGATT AGACCGTAGC GGCGGTGGAG GATCAAAACC CGGAAGTGTA GAGAGTGGTT TCGTCGGAGG AGAAGGGAAG AGACGAAGCA GCTACGGTGA AGGAGGAGAC AGTGATGCGA CGTCGGCGAC AGATAGGAGC AGACTTGTGT TTTTCGAGAG GAGGAAACAG TTTGAGCTTG AGGATTTGTT GAAAGCATCT GCGGAGATGC TTGGGAAAGG AAGTCTAGGG ACGGTGTACA AGGCGGTGCT TGACGATGGC TCAACAACGG TGGCGGTGAA GCGGCTTAAA GACGCGAATC CATGTCCGAG GAAAGAGTTT GAGCAGTACA TGGAGATTAT TGGTAGGCTT AAACACCAAA ACGTTGTTAA GCTCAGAGCT TATTACTACG CTAAAGAAGA GAAGCTCTTA GTTTATGAGT ATCTTCCTAA TGGAAGCTTG CACTCCCTTC TTCATGGGAA CCGAGGTCCT GGACGGATTC CATTGGATTG GACGACGAGG ATTAGTCTAA TGTTAGGAGC AGCGAGAGGC TTAGCAAAGA TTCACGACGA GTATAGCATC TCAAAGATCC CTCACGGCAA CATCAAATCC TCCAATGTTC TATTGGACAG AAACGGCGTC GCGTTAATCG CTGATTTCGG TTTATCACTT TTGCTAAACC CGGTTCATGC TATCGCACGG TTAGGAGGCT ACCGTGCGCC GGAACAGTCA GAGATCAAAC GGCTCTCTCA GAAAGCTGAC GTGTACAGCT TCGGTGTGTT GCTTCTCGAG GTTTTAACAG GAAAAGCTCC CTCGATATTC CCGTCTCCTT CGAGACCTAG ATCGGCGGCG TCGGTGGCGG TGGAGGAGGA GGAAGAAGCG GTGGTTGATT TACCGAAGTG GGTTAGATCG GTGGTGAAGG AGGAATGGAC GGCGGAGGTT TTTGATCCGG AGCTTTTGAG GTATAAGAAT ATTGAGGAGG AGATGGTGGC GATGCTTCAT ATCGGTTTAG CTTGCGTCGT GCCGCAGCCG GAGAAGAGGC CGACGATGGC GGAGGTTGTT AAGATGGTTG AGGAGATTAG AGTTGAGCAA TCTCCGGTTG GTGAGGATTT TGATGAGTCA AGGAACTCAA TGTCGCCGTC GTTGGCTACC ACCGAAGACG GCTAA 
Length2025
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16473986.. 16476230
Download Sequence
A.thaliana
AGI-codeAT2G36570.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias[PXC1][PXY/TDR-correlated 1]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg476492 Auxin efflux carrier family protein
7.68115 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
11.4891 Ahg496307 Leucine-rich repeat protein kinase family protein
12.0416 Ahg473038 arabinogalactan protein 31
17.7482 Ahg478217 Protein of unknown function (DUF740)
18.735 Ahg939416 PATATIN-like protein 9
19.8997 Ahg489123 cellulose synthase-like A02
22.4944 Ahg927275 mechanosensitive channel of small conductance-like 6
25.219 Ahg492491 cytokinin response factor 2
25.9808 Ahg488793 Heavy metal transport/detoxification superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression