Detail



ID : Ahg473308

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473308|fgenesh2_kg.1__3262__AT1G30780.1
Sequence
ATGGCATCAC TTTCACTTGT GCTTAGATAC GTCGTCGTTT TAACTTTCTT CATACTCGAA AACCCCAAGG AAACATTTTC TTCGCGACTA GCGAGACCCC CAGCTAAAGT AGCTCAGATT GGAGCCGATG ATTATCCATC TTCCGGTCGT AGTACACCGG TCCACGACCT TGGATTCCCT GACTTCCCTT CTTTCCAAGA AGCAGTGGCA CCACCACCGC CTCCGCCTGA TCTTCCTCTC CTACCGCCGC CTCTGCCTGA TCTGGCTCTC CTTCCACCAC CGGCATTTTC TGATCCTGAG AAGCCTAGGT TATCGGTTCC GGTTTGGCCT TCACTACCCG ATTTCCCGCC CTTTCCATTC GTAGATCAGG CTGCTCCTTC CCAACACTTC GCTCCGAGAT TCGATGAGTC CGATAATTGG ATGCCTTCTA CCCCAAGTAT CCCTCAAGTG TTTGCGATAC AATCTAATCT TCTCCAAGTT CTGCTTCTGC AGCAGCCCAA ATTGCCTGCC AAGTTTAAGA TGAAGAAGAG CCACCAAAAG AAACTCCTTT GCCGAGTGGA ATCTGAGGTT TGTTTTGGAG ATCATAATGA GAAAGACACA AACCCTAGCG AGATAGATTC GCTCCCTCTT GATCTAAAGA TGGCTATACT TACTAGATTG CCTGCCAAGT CTCTTACGAA TCTCAAACAC GTCTCTAAAA TGTGGTCTTC CATCATCCGA AGCCGAGGAT TCATCGATTA CTTCTTCTCT GTGTCCACGG AGGAAGTCAT AAAGTTACCC GTTAACACCC GATTCGTGGG ATACGATCCG ATTGATGATC AACACAAAGC GTTATTAGTG CAGTCGATAA ATCATAGTGA TCATCTAGAG CACAAGGTCT TAACACTAGG GGGAGGTGGT CAAGGATGGA GACACATCGA AGGTACCACT GCGCCTTATA GCCCGATATC AGTGGGAGTA TGCATCAATG GTTTTGTCTA CTATGGTGCT TATAGTCGAA ACCGACCTAT CAATCCAGTT ATGGTGTGTT TTGAGGTTAG GTCTGAGAAG ATAAGTTTTA TCAAAGCTCC TGAAGATGTC GTGCATTGGG GGAATGAAGC AATATTCATA GAATACAAAG GGAAGCTAGC TTTTGATTTA TGGATACTAG AAGACGTTGA GAAACATGAA TGGTCAAAGC AAACATGTGT GTTTCCCTCC TCTGTGTGGG ATGATGTTGG GGATATCAAA ATGTCTTTTC CAGGCACCAA CAAGGCTGGA ATCGGAGACG ATGAAGAATT TAGGCGCTCT TCTGGATTCG TAGACAAGGG TGAATGCCAT GTCCGCATCG CACCTCAACA TGTCGAGAGT ATTGCCCATT TTAAGGATCC TATCATTTAA 
Length1380
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13163421.. 13173403
Download Sequence
A.thaliana
AGI-codeAT1G30780.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg490578 cellulose synthase like D4
8.83176 Ahg933779 Domain of unknown function (DUF313)
12.3693 Ahg921700 ENTH/VHS/GAT family protein
16.7332 Ahg912947 Polyketide cyclase/dehydrase and lipid transport superfamily protein
17.4929 Ahg331183
18.7083 Ahg335836 EF hand calcium-binding protein family
20.4939 Ahg946420 RING/U-box superfamily protein
21.3542 Ahg344438
22.9783 Ahg907632
24.2693 Ahg933363
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression