Detail



ID : Ahg490578

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490578|fgenesh2_kg.7__11__AT4G38190.1
Sequence
ATGGCGTCCA CACCCTCTCA AACTTCTAAA AAGGTCCGTA ACAATTCCGG TAGCGGCCAA ACCGTCAAAT TTGCAAGACG AACATCTAGC GGACGATATG TGAGTTTATC TCGAGATAAT ATTGAATTAT CAGGCGAGCT CTCTGGGGAC TATTCTAACT ATACGGTGCA CATACCTCCG ACGCCGGACA ATCAGCCCAT GGCCACCAAA GCCGAAGAGC AATACGTGTC CAATTCTTTA TTTACTGGTG GTTTCAACAG TGTAACACGT GCACATCTTA TGGACAAAGT CATCGATTCA GATGTCACAC ACCCTCAGAT GGCTGGCGCT AAAGGCTCCT CGTGTGCCAT GCCTGCTTGC GACGGAAAAG TCATGAAAGA CGAGAGAGGA AAGGACGTGA TGCCATGTGA ATGCCGGTTC AAGATCTGTA GGGATTGCTT CATGGACGCC CAGAAAGAGA CAGGTCTTTG TCCAGGATGC AAGGAACAAT ACAAAATCGG GGACCTAGAT GACGATACGC CTGATTTTTC TAGTGGTGCT CTCCCCTTAC CAGCTCCAGG GAAAGATCAA CGTGGCAACA ACAACAACAT GTCTATGATG AAGAGGAACC AAAACGGTGA ATTTGATCAC AACAGATGGT TATTCGAGAC GCAAGGCACA TATGGTTACG GTAATGCGTA TTGGCCTCAA GACGAAATGT ATGGCGATGA TATGGATGAA GGAATGAGAG GCGGCATGGT GGAAACAGCT GACAAGCCAT GGCGGCCATT GAGCCGACGA ATCCCAATCC CAGCCGCCAT CATTAGTCCG TACAGATTAT TAATCGCCAT TCGTTTTGTC GTGCTATGTT TTTTTCTAAC TTGGAGGATC CGAAATCCTA ACGAGGACGC GGTATGGTTA TGGCTGATGT CTATAATATG CGAGCTTTGG TTTGGATTTT CATGGATTCT AGACCAGATC CCTAAGTTGT GTCCAATAAA CCGGTCCACT GACCTGGAAG TTCTTCGTGA CAAATTTGAC ATGCCTTCTC CCTCCAACCC CACAGGGAGG TCTGATCTTC CAGGTATTGA CCTTTTTGTG TCAACGGCAG ATCCAGAGAA AGAGCCACCC CTTGTCACCG CCAATACTAT TCTGTCCATA TTGGCCGTTG ATTATCCGGT GGAGAAGGTG TCATGCTATC TTTCTGATGA TGGAGGAGCT CTTCTATCCT TTGAAGCTAT GGCAGAAGCT GCTAGCTTTG CGGATCTTTG GGTACCTTTT TGTCGCAAAC ATAACATTGA GCCCCGAAAT CCAGACACGT ATTTCAGTTT GAAGATAGAT CCAACAAAAA ATAAGAGCAG AATTGATTTT GTCAAGGACA GAAGGAAGAT TAAGAGGGAG TATGATGAAT TCAAGGTTCG CATCAACGGC CTCCCTGACT CAATACGGAG GAGGTCAGAT GCATTTAACG CAAGGGAGGA AATGAAAGCA CTAAAACAGA TGAGGGAGAG CGGAGGTGAT CCAACAGAAC CTGTTAAAGT CCCCAAAGCC ACGTGGATGG CCGATGGCAC CCACTGGCCA GGAACTTGGG CAGCCTCTAC TCGAGAGCAT TCCAAAGGTG ATCATGCTGG GATTCTCCAG GTGATGTTGA AACCACCTAG CAGCGATCCA TTAATTGGCA ATAGCGACGA TAAAATCATT GACTTTTCAG ACACGGACAC TCGTTTACCC ATGTTTGTCT ATGTGTCACG TGAGAAGCGA CCGGGCTATG ATCACAACAA GAAAGCTGGA GCCATGAATG CACTTGTTCG TGCCTCTGCT ATTCTCTCAA ATGGACCTTT TATCCTTAAT CTTGATTGTG ATCATTACAT CTATAACTGT AAGGCCATCC GAGAAGGGAT GTGTTTTATG ATGGACAGAG GTGGTGAAGA CATTTGCTAC ATTCAGTTTC CGCAAAGATT TGAAGGCATC GATCCTTCTG ATAGATATGC TAACAATAAC ACTGTTTTCT TTGACGGTAA TATGCGTGCT CTCGACGGAG TCCAGGGACC AGTTTATGTT GGAACAGGTA CTATGTTTAG GCGCTTTGCT CTCTACGGTT TTGATCCACC CAACCCTGAC AAGCTTCTTG AGAAGAAGGA ATCAGAAACA GAGGCTCTAA CCACCAGTGA CTTTGACCCG GACCTTGATG TCACACAACT CCCTAAGCGC TTTGGCAACT CCACACTCCT AGCTGAGTCA ATTCCTATTG CAGAGTTCCA AGGTCGTCCA TTGGCAGACC ACCCGGCTGT CAAGTACGGT CGTCCTCCCG GAGCCCTTAG AGTCCCTCGT GACCCACTTG ATGCTACCAC TGTCGCAGAG TCTGTTTCTG TAATCTCTTG TTGGTATGAG GATAAAACGG AATGGGGAGA TAGAGTTGGG TGGATTTATG GGTCGGTGAC AGAGGACGTG GTCACAGGAT ACCGCATGCA TAATCGTGGG TGGCGCTCTG TTTACTGCAT CACTAAGCGA GATTCTTTTC GAGGCTCTGC TCCCATTAAT CTCACGGATC GTCTTCACCA GGTGTTGCGG TGGGCCACTG GGTCTGTTGA GATCTTCTTC TCTAGAAGCA ACGCCATTCT CGCCTCCAAA CGTCTCAAGT TCCTCCAACG TCTCGCATAC CTCAATGTTG GGATATACCC TTTCACGTCT CTGTTTCTCA TCCTCTATTG TTTTCTTCCG GCATTCTCTC TTTTCTCTGG ACAGTTCATC GTGCGGACGC TCAGTATCTC CTTCTTAGTC TACCTTCTTA TAATCACCAT TTGTTTGATT GGCTTGGCGG TTTTGGAGGT CAAGTGGTCT GGCATTGGGC TCGAAGAATG GTGGAGAAAC GAACAGTGGT GGCTCATCTC AGGAACAAGC TCTCACCTTT ACGCAGTGGT CCAAGGAATC CTCAAAGTGA TTGCAGGGAT CGAGATCTCC TTTACCTTGA CTTCCAAGTC AGGGGGAGAT GACAATGATG ACATATACGC AGATTTGTAC ATAGTGAAAT GGTCGTCGCT GATGATACCG CCTATAGTGA TAGCAATGGT GAACATAATA GCTATTGTGG TGGCGTTCAT AAGGACGATA TACCAAGCGG TGCCACAATG GAGCAAGCTA ATAGGAGGAG CATTTTTCAG CTTCTGGGTG TTGGCGCATT TGTATCCATT TGCAAAAGGA TTGATGGGAC GAAGAGGCAA AACTCCAACG ATAGTTTTTG TGTGGGCAGG TCTGATTGCC ATCACCATCT CTCTACTGTG GACGGCCATA AACCCAAACA CCGGACCTGC AGCTGCTGCT GAGGGTGTTG GAGGCGGTGG TTTTCAATTC CCGTAAAAAG CATTCATATA GGGCGACTTG AGAGTTTTGT AGACTAATCA CAAGAAATTA ATACGCTTAC TATCTTTGTT TCCTTTTATT TTTTTTATTT GTTTTTGTTT CTTCTGGTAG TAAATTTTCA GATAACTACA TATAATCTGG ATTGAGATGT CATGACTGTA TAAATCAGCC TTTGTAT 
Length3517
Protein Sequence
Protein Residue
Map Locationscaffold_7: 23977.. 27668
Download Sequence
A.thaliana
AGI-codeAT4G38190.1
Descriptioncellulose synthase like D4
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLD4][CSLD4][ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE D4][cellulose synthase like D4]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg351608 Protein of Unknown Function (DUF239)
4.69042 Ahg940214 glycine rich protein 17
6.32456 Ahg473308 F-box associated ubiquitination effector family protein
7.48331 Ahg907632
7.74597 Ahg488739 Integrase-type DNA-binding superfamily protein
7.93725 Ahg341831
8 Ahg321478 Fatty acid hydroxylase superfamily
8.48528 Ahg947612
9 Ahg925744
9.48683 Ahg352619
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression