| Annotation |
|---|
| Description | jgi|Araly1|474028|fgenesh2_kg.1__3982__AT1G48880.1 |
| Sequence |
ATGAGTAATT TCACAAAGAG TTCATCATTC AATAGAAGGG CATTGAGTTC CTTAGCTATA GAAAGCCCTA GGAACTCTTC TTCTAGTGTC TTCACTAGTC CCATTGGCTC AGCTTTCGCT AGCCCGAGAT CACAGAACTT TGGAGGAAGT CCACGCCCGT CTACTAATCG GTTAAAAGAG ATCTCATATT TGTTTCAGGT GCTTATTATC GCCGGAACTA TTGTGTCGTT TCTTGTTATC ATCGCTGGGG GTTATTTGTA TGTTGTTCCT AGCCTCGGTC AAACGTTCTT GGGTTACAAT GGGACATTGG AGTTTAATAG CTCCGTTGCG GGTGATAAGG AATGTGATAT ATTCGATGGG AATTGGGTCG TTGATGATAA CTACCCATTG TATAACGCTT CGGAGTGTCC ATTTGTAGAG AAAGGATTTA ATTGCTTAGG GAACGGGCGT GGACACGATG AGTATTTAAA GTGGAGGTGG AAGCCTAAGC ATTGTACTGT TCCAAGATTT GAAGTACGTG ATGTATTGGA GAGATTAAGA GGTAAAAGGA TAGTTTTTGT GGGAGATTCG ATGAGTAGAA CGCAGTGGGA GTCTTTGATA TGTATGTTAA TGACAGGGTT GAAAGATAAA AGAAGTGTTT ATGAAGTCAA TGGGAACAAT ATAACGAAAA GGATACGGTT TTTGGGTGTG AGGTTTAGTT CCTTTAATTT TACAGTTGAG TTCTACCGAT CGGTTTTCTT AGTTCAGCCT GGGAGGCTGC GTTGGCACGC ACCAAAACGT GTAAAGTCAA CGTTAAAGTT AGACGTTTTA GATGTTATTA ACCACGAATG GAGCTCAGCT GATTTTCTCA TATTCAATAC TGGTCAATGG TGGGTGCCTG GGAAGCTTTT TGCAACGAGT TGTTACTTTC AGGTTGGAAA TTCATTGAGG CTCGGAATGT CAATTTCTGC AGCGTATAGA GTAGCATTAG AGACATGGGC ATCATGGATA GAGAATACTA TTGATCCAAA CAAAACCCGG GTTTTGTTTC GTACATTTGA GCCATCGCAT TGGAGTGATC ATAGATCATG CAATGTGACA AAGTATCCAG CCCCGGATAC TGAAGGAAGA GACAAAAGCA TATTCTCTGA AATGATCAAA CAAGTAGTGA AGAATATGAC AATTCCAGTA TCAATATTGG ATGTAACTTC GATGTCAGCG TTTAGAAGCG ATGGTCATGT TGGTTTATGG AGTGATAATC CTTTGGTTCC TGATTGTAGT CATTGGTGTC TACCTGGACT ACCTGATATC TGGAATGAGA TCTTGCTCTT TTTCCTCCTC TCTAGACAAG TTCAGTAAAA TGGATAATTG CAGCATAGAA AAAAGATTAA CGACCCTCGA AGTCTGAATC TCTCGGAGCT AATTGCTCAT ATTTATTCTG GGAGCTAAAG ACAGATAAAG GGGTCCAAAT ATTGGTGAAA GTTAAAAATG ATTCTTACTT AATTCATTCT TTTATTACTT CTTCTA |
| Length | 1506 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 23853160.. 23854948 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G48880.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 7 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL7][TRICHOME BIREFRINGENCE-LIKE 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 35.242 |
Ahg925145 | formin homology 2 domain-containing protein / FH2 domain-containing protein |
| 43.8292 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 53.5257 |
Ahg473654 | auxin response factor 14 |
| 54.4426 |
Ahg358371 | Pectin lyase-like superfamily protein |
| 58.4038 |
Ahg481075 | |
| 62.6418 |
Ahg475062 | Pentatricopeptide repeat (PPR) superfamily protein |
| 82.9699 |
Ahg929770 | Protein kinase superfamily protein |
| 91.2305 |
Ahg916456 | proline-rich extensin-like family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|