Detail



ID : Ahg474053

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474053|fgenesh2_kg.1__4007__AT1G49120.1
Sequence
ATGATCAGTT TCAGAGAAGA GACCATCGAT CTCAACTTGA TTAAAACAGT TAATATAATC TGTAATGATC CCGACGCTAC TGATTCCTCT AGCGACGATG AATCTATCTC CGGCAATAAT CCTCGCCGTC AGATCAAACC AAAGCCACCA AAGCGTTACG TCTCAAAGAT CTGTGTCCCG ACGCTGATCA AAAGGTACGA GAACGTTTCG AATTCTACAG GGAATAAAGT AGCCGGAAAC CGGAAATCGT CGTCGGGTTT CAAAGGCGTA CGACGGAGGC CGTGGGGGAA ATTTGCGGCG GAGATAAGAA ATCCGTTTGA GAAGAAGAGA AAGTGGCTTG GAACGTTTCC TACTGAAGAA GAAGCAGCAG AGGCTTATCA GAGAAGTAAA AGAGAGTTTG ATGAACGATT AGGTTTAGTT AAACCGGAAA GAGATGTAAC CAGGCCTTGT GGTGTACGTA AACCTGAAGA GAAGGAAGTT ACTGACAAGT CAAAATGCAA AAAGGTAAAT AAGAGAATTG TTACTGAGAC GCCATTCGGT TGTGGTTATA ATGCTGATGA AGAAGAGGGA GTGATTGGTA AAATGTTGGA AGATCCGTTG ATGACATCCT CGATTGCGGA TATTTTTCGT GATTCGGTTG TTGAAGCAGA TGATATTTGG GTGGATTACA ATTCAGTGGA ATTTAATTCG ATTTTAGATG ATCTAAAGTT AGATTTTGTG GAGAATATTG ATAGTGTAGG CATGGAGAAA ACATTCGGAT TTAAGATTGG GGATAACACT AAGGTTAATC AACACACGAA AATCGTATCG ACGATTGCAG ATATTTTCGA CGATCCGTTG TTAGATGATT TTAAGTTAGA AGATTTTCCG ATGGATGATT TTGGATTATT AGGAGATCCA GAGGATGATG ATTATAGTTG GTTTAATGGT ACTACTGATT GGATCGATAA GTGTTTATGA 
Length960
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24005971.. 24006939
Download Sequence
A.thaliana
AGI-codeAT1G49120.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
Alias[CRF9][cytokinin response factor 9]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg475240 AGAMOUS-like 55
3.4641 Ahg922302
6.78233 Ahg924238
8.83176 Ahg337696 COP1-interacting protein-related
20.0749 Ahg951667 lupeol synthase 1
22.7596 Ahg937866 HXXXD-type acyl-transferase family protein
25.632 Ahg929654 F-box and associated interaction domains-containing protein
26.7208 Ahg938827 Arabidopsis phospholipase-like protein (PEARLI 4) family
27.9285 Ahg313228 Domain of unknown function DUF220
29.9333 Ahg344287
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression