Detail



ID : Ahg474193

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474193|fgenesh2_kg.1__4147__AT1G50620.1
Sequence
ATGGATGTGG CGATTAGTGA TGTACCGGAG AATCTTGAAT CTGTTGTAGA AACGAGAGAT GAAGAAAATG TGGAAGAATC GCCGGTGAAG AAGAAGCCAC GTTTTGATGA AGAAGTGAAT AGAGTGGCGG AGATTGTATT GGTGTTATCG GCATTGCGGA AGATTCGAGG TGGGAAAACT CCGACTGAAT TGGAGATTGA GCTTATGGTT GAAGCTAAAT CGAAATTGGT TGACATGTGT CAAGAGTTTA CTCCCAGAGA TATTATTGGT ATTGATGCTA TTGGAGCTGT CATTGAAGAT CTGGGTTTGA ATGGTAAGCT TAAAGACCAG CGATTAGGGT TTCGAGCTCC TAAATTAACC ATCTCTGAGA AGCTGTCTCT TGGGAAGAGA AAGATGGAAG AATTGAAAAA AGCCCCAATA GTATCCACTA CCTATACATC TCCAGCAAGT AATGTGTCTA TGGCGCATCA GTGGCCTAAT AGCGATATGA AGGCATCCAC TAGTTCTGTT AATGCATCTG GAAGGGAAGC ATCAGGAATA ACACAAGCTA GAATGGAGAG ACCGCAGTTT AAGTCAGATA TGCATACCGG TACTTCTCAG GGACCAGCAG TTACTGCCGG AAATTACTTT GGGAATACTA CATCTTGGTC TGCCCAACCT CATTCCAGTT CCTCCACCAT ATCATTTGGT ACTGCATCGG ATAGCAAGGT TCCTGTTCAG GGCTCTTCCA GAATCTCAGA TCCGAGCTTT AGACCATTTA TGTCTCAAAC TCCACCAGGT CCATTCCCAG GCATGAAAGG GGTGACTTAT GGTCAAACTT CTTCATCTTT TGGAAACAAC CACCATGCTG AAATTGCTAA GTTAATCCAT AAAGTTCTGC AACCGCAGGC TAAACAAAAT CTCTTGTGGA ACCCACCTTC AAGAGAGTAC ATGAGTAAAG CAATGACATG CCAAATGTGT CAAGGAACTA TCAATGAAGT AGAAACGGTG CTAATCTGTG ATGCTTGTGA AAAAGGGTAT CACTTGAAAT GTCTACAAGC TCACAATATA AAAGGTGTTC CGAAATCTGA ATGGCATTGC TCAAGATGTG TGCAGTTATA CAATGGCAAG TCTTTTCCTC CTAAATACGG CCGTGTCATG AGAAGCGCCA CTACAGCAAA AATGTCTTCT AGTACAGCCG AAGTTCAGTT ACCCGCAGAG AAGAGGGTTG GTAAAATGGA TCAAAAGGTT AGTCAAGAGG CAATGCCACA TCTCGAGACA GCAAAACCAA CTAAGGATTC AGCTATGGAA CAAACAGTTG AAGATGCAGC TATGGAACAA ACAGTTGAAG ATGCAGCTAT GAATCCAATA GTTGAAGCTG AAGGTGAAGC TATGAATCCA ACAGTTGAAG CTGAAGATGG AGCTATGAAT CCAATAGTTG AAAAAGCTAT GAGCCAAATA GTTGAAGCTG AAGATGCAGC TATTAATCAA GCAGTTGATG CTAACTTAAA AACACAATTT CCTATAGCAA ACGATGATGC TGAGTGTGAT GATCCTTCAG AACCAGTATC TCACTCAGAG ACTCTTAATC TGCCAGAACC AGAGAAAAAA GAAGTTCTGA GCAAAAATCC TACTGAGAGA TGTGTTTCCG CAAATAGTCA AGATAAAAAC TCAAAGATCA TAGCTGAATC ATCATTACAA GAGGAGAATT CAGCTTCTCA GACAGAGAAC TCACCAACCC AGCTTCCTTT GCAATCCAAC ACAGATCATT CCCAACCGCA GAACATGACA CCAAATGTGG AAGAGGCTAT ACAGAAAAAT GTCACAGAAA ATCCAGAGGA AGACAAAAGC TTTTAAATGT TTCAGACAAA AGTTGCAGGA ATCAGAATTC ACTCTGTCCA CGGCAGTCAG TACTCGCACT CTATTTGGTC CTCAAGTATA TATAAAGTAA GTGATGATGT CTTTGATATA ACCTTTTTGG GGTAGGTTGA ATTACTAAAT GTTTTATTCT ATGAAGTGCG TGTGGCCGTT CAATTTTCTG AGCATAAGTA GTGACTGATT TAGTTTAGCT TGAACCTTTT TTAAGACACT TTGTGAAATA TTTCCTTAAT TCACTGT 
Length2097
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25218772.. 25221584
Download Sequence
A.thaliana
AGI-codeAT1G50620.1
DescriptionRING/FYVE/PHD zinc finger superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg497150 ARM repeat superfamily protein
5.38516 Ahg322858 hydrolases, acting on ester bonds
17.4356 Ahg496360 DCD (Development and Cell Death) domain protein
29.9333 Ahg496159 ROP interactive partner 5
33.6303 Ahg949223
38.3927 Ahg489298 3'-5' exonuclease domain-containing protein
39.3446 Ahg924243 HSP20-like chaperones superfamily protein
42.6615 Ahg471639 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
43.0581 Ahg485337 receptor like protein 44
44 Ahg479958 MUTS homolog 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression