Detail



ID : Ahg474202

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474202|fgenesh2_kg.1__4156__AT1G50700.1
Sequence
CCCGAACTTT TCATGATTCT TCTGCAATTC AACTTTCCTT TGTTCTGATC TCTTAAACCC AAATCATTGC TTGATGAAAC AAGTTCGTTG TCTGTAGTTG CTGAGTTGAT ACACTTCCAC GTCTCCTAGT ATAAACCCAC CAAAAAAAGA TCAAACCTTT GCTTTTTCTC TGTTTCATTT TCTTGATTCT CTACAAATTT TTACGCAAGT TTCGATCTTT TGTCTCTGGG TCGTGACATT TTGAGCTGAT TTAGCTAAAA CAGAGACGAA AAAGCAATGG GGAATTGCTT AGCCAAGAAA TATGGAGTGG TGATGAAACC ACAACAAAAT GGTGAAAGAT CAGCTGAGAT CGAGAACAGA GGAAGGAGTA ACCACCAATA TCCGCCGGAG AAACCTACTG GAACGAATCA ACCACCGCCG TGGCGGAATC CGGCGAAACA CAGTGCTGCT GCAGCTATAC TCGAGAAGCC GTACGAAGAC GTGAAACTGT TCTACACGCT GAGCAAAGAA TTGGGTCGAG GCCAGTTTGG AGTAACGTAT CTGTGCACAG AGAAGTCGAC GGGGAAGAGA TTCGCTTGCA AGTCGATTTC GAAGAAGAAA CTTGTGACGA AAGCTGATAA AGAAGATATG AGGAGAGAGA TTCAGATCAT GCAGCATTTG AGTGGACAAC CTAACATTGT TGAGTATAAA GGAGCTTATG AAGATGAGAA AGCTGTGAAT TTGGTTATGG AGCTTTGTGC TGGTGGTGAA TTGTTTGATA GAATTTTAGC AAAGGGACAT TACAGTGAGA GAGCAGCTGC TTCTGTTTGT AGACAGATTG TTAATGTTGT CAACATTTGT CATTTCATGG GTGTGATGCA TAGAGACTTA AAGCCTGAGA ATTTCTTGTT ATCTAGCAAA GATGAGAAGG CTCTTATTAA AGCCACTGAT TTCGGATTAT CGGTCTTTAT TGAAGAAGGG AGAGTGTATA AAGGTATAGT TGGGAGTGCA TATTATGTAG CTCCTGAAGT TTTGAAGCGT AGATACGGTA AAGAAATCGA TATATGGAGT GCTGGAATTA TACTATACAT TCTACTTAGC GGTGTGCCTC CGTTTTGGGC TGAAACCGAG AAAGGGATAT TTGATGCTAT ATTGGAAGGT GAAATCGACT TTGAATCCCA ACCTTGGCCT TCAATTTCCA ATAGTGCTAA AGATTTGGTA CGCAGAATGT TGACACAAGA TCCGAAAAGA CGGATTTCTG CTGCTGAAGT TCTTCAGCAT CCATGGCTAA GAGAAGGTGG AGAAGCATCA GATAAGCCTA TTGATAGTGC TGTTCTCTCA AGGATGAAGC AATTTAGAGC GATGAATAAA CTAAAGAAAC TTGCTTTAAA GGTCATTGCG GAGAACATTG ACACGGAAGA AATACAAGGC TTAAAGGCGA TGTTTGCTAA TATAGACACA GACAATAGTG GTACAATCAC ATATGAAGAA CTGAAAGAAG GATTAGCCAA ACTGGGATCA AAACTCACTG AAGCTGAAGT GAAACAGCTC ATGGATGCTG CTGATGTTGA TGGAAATGGG TCAATTGATT ACATTGAGTT TATTACTGCA ACAATGCATA GACATAGGCT TGAAAGTAAT GAAAACCTTT ACAGAGCCTT CCAACATTTT GACAAAGATG GGTGTGGATA CATTACGATA GACGAGCTAG AGGCTGCTTT GAAGGAATAT GGAATGGGAG ATGATGCTAC AATCAAAGAG ATTTTGTCAG ATGTCGACGC CGATAATGAC GGTAGAATTA ACTATGAAGA GTTTTGTGCT ATGATGAGAA GTGGGAATCC ACAACAACCA AGACTATTCT AACACATTTT ATTTGTGTCT TCTATGTCTG AATCTAATCC AAAAAGACAA GAGTTGTATT ATTATTGTTG TTCAGGCAAA A 
Length1921
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25278051.. 25280597
Download Sequence
A.thaliana
AGI-codeAT1G50700.1
Descriptioncalcium-dependent protein kinase 33
TAIR curator summarymember of Calcium Dependent Protein Kinase
Alias[CPK33][calcium-dependent protein kinase 33]
Gene coexpression
MR
MR Locus Description
6 Ahg951371 RAB GTPase homolog A4A
6.9282 Ahg472471 methyl-CPG-binding domain 8
8.48528 Ahg892739 nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
20.3961 Ahg479621 RNA-binding (RRM/RBD/RNP motifs) family protein
21.2132 Ahg473458
21.7256 Ahg921459 Acyl-CoA N-acyltransferases (NAT) superfamily protein
22.383 Ahg487366 sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors
26.7208 Ahg919363 Nucleotide/sugar transporter family protein
38.3667 Ahg945926 STRUBBELIG-receptor family 8
41.5331 Ahg479521 protein arginine methyltransferase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression