Detail



ID : Ahg479621

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479621|fgenesh2_kg.3__2322__AT3G20930.1
Sequence
AAGCAAAAAA GAGTTGCCAT GGAAGCTCTT ATTGCTCCCA CTTCCTTCTT CCTCCCCATC TCCAACTCTT CCTCACACAT TATCAATAAC AGATTCTTCC CTTCATTTTC TTCTCCCAAC TTAAATTTGG GGACTTTTCG GAAAACTTAT ACCTCCTTGT CACCATCACA CATCGTCTTC TCCTCTTCTG CAATTTCCGC ACCACCTTCT TCTACTGCTC CTTCTACCCG AAACAGCTAT TGGATGGTGT TATTGGATAA ACCTCCGCAA TGGGTTTCTT CCAAATCAGA CATCGTTGAT TATTATGTCG AGATTCTTGC GAAAGTACTG GGAAACGAAA AAGATGCCCA AGTGAGTATA TATGATGCTT CCTTTGATAC CCATTTCGGG TTTTGTTGTC ATATCGACGA AGATGCCTCA CGCCAGCTCG CTTGTTTACC TGGAGTAGTG TCTGTTAGAC CTGAAGCGGG TTACAGTTCA GAGAAGAAGA ATTATGGTTT TGGGAATCAG ACATGTGTTT CATTGTTTGA TCATGGGACA GTGAAACATT GGATGGTTAG AATAGATAAG CCAGGAGTTG GAATTGTTAC TAAAGCACAG ATGGTTGATC ATTGTGTTCA ATTGCTATCC AAGGTTTTGT GCAATGAAAA GGATGCACAG ATGTGTCTTT ATCATGTTTC CTGGCAGTCT GATTTCGGAT TTTGTTGTGA TCTCGATGAG AACAGTGCCG TGGAGTTAGC TGGCGTACCT GGTGTTCTTG CGGTTGTTCC TGATAACAGT TTCGAGTCAC TAAACAAACA CTATGAAGGG GATAGTACAC AAGCTTCACG AGATCAAGAT GATTCAGAGT CTCCTCCCGT AAAGACGAAG AAGCTGTTTA TAACTGGACT GTCTTTCTAC ACATCTGAGA AGACATTACG TGCAGCATTT GAAGGGTTTG GTGAACTAGT GGAAGTCAAA ATAATTATGG ACAAGATATC AAAGAGATCA AAAGGCTATG CCTTTCTAGA GTACACGACA GAGGAAGCCG CAAGCACTGC ACTAAAAGAG ATGAATGGAA AGATTATTAA TGGGTGGATG ATAGTAGTAG ATGTAGCCAA GACCAAACCA TTCAGGCAAA ACAGAAGTCA ACTGAGTTTG GGGTTCTAGA A 
Length1151
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8712095.. 8714143
Download Sequence
A.thaliana
AGI-codeAT3G20930.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[ORRM1][Organelle RRM protein 1]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg482359 Alba DNA/RNA-binding protein
6 Ahg494798 Galactose oxidase/kelch repeat superfamily protein
20.3961 Ahg474202 calcium-dependent protein kinase 33
23.5584 Ahg488367 Ribosomal protein L27 family protein
35.327 Ahg495283 Protein of unknown function (DUF2930)
42.4971 Ahg496808 HAESA-like 2
42.9651 Ahg950741 Pentatricopeptide repeat (PPR) superfamily protein
44 Ahg486292 TRAF-like superfamily protein
44.7214 Ahg478448 TRICHOME BIREFRINGENCE-LIKE 32
45.6946 Ahg312653 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression