Detail



ID : Ahg474787

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474787|fgenesh2_kg.1__4741__AT1G56230.1
Sequence
ATGTCTTGTC TTTAGATACT CTCCTACTCT CTCTCCGAGA ACTTAATGTC TCTTGAACGG TCGGAGTTCG CCGACGGTGT TGCGGCACGA AGTCTAAGCG AGATTTCAGA AGTTGACGCC GTGAGAATCG GAACTGATAT TGTATCTTCA GCGAGACGTC TCATCGCACT ATTAAGGTCC GTCGGAGATT GTCAATGGCT TCATCATCCA CCCGTTATTG CTGAAGCTAT TAGAAGGTAT GATGAGCTAT GGATGCCGTT GATTTCTGAT CTAACGGTTG GTTTGAAGCC ACCAATGATT TTGCCTCCTC TTGATGTTGA ATGGGTTTGG TTTTGTCATT GTTTGAATCC AGTGAGTTAT ATGGATTACT GTGAAAAGAG ATTCTCAAAA CTTATAGGGA AGCCTGCGAT TTACGATGAA GAGAACGAGG ATTACGCGGT TTTACAATGC GAGAAAATCT GGAGTTTACG ATATCCGTTG GAGAGTTTTG AGAACAGAGC TGATCCTGAT TCACTTGAGA CTGTTTCTTC AGTTAATGAA GATATTAAAA GTCTAGTGGA GAAGCAGAAG TGTCTTTGGG AGAAGTTTTC AGCGCCTTAC ATGTCTGAAA CCGTTTACTT GATCGCTGCT CGGTTACGTT ACAAAGGGTT TTTGTTGATT CTACATAAGT TTAAAGATGA GGTTTCTAGT CTTATTCCAG CTTCTGATAT ACTTCTTATG TGGCTTACGC ATCAAAGTTA CCCGACGGTA TATAAAGATG ATGTTGATGA AGTGTTGGAG GAGATGACGA GAAAAGTAGT ACAAGTTGGA GAAAAGGTAG AGAAAACAGA AGTGGAAACA ACGAAAGAAC TGTGGGATAG ATACTTCAAT CAACCGTATG AGAAAGCAGG CGGCGAATTG ACGATAATAT CGAATGAGTC TGGTTTAAGT AACAACACTG TGTTTTATTG GCCTGTCTCT GATATGGATG TTAACACCGC GTATAAGTCC ATTCGACCTA GATTTGTTTT GGAATTGTGT GTATTTCTAA GGCTGAATCC AAAGGCAGAG AGGAATGAGT CGATGGATCG GAGTTTTCTT CGTTTGAGAG TTGCTAGATG TCATAGAAAG CTGCAACTGG ATAAGAAAAT GACTGATTTA TCTTGCGATG CGTCGTGGCA GAAAGCGTGG CATCTTTACT GTGAGTTTGG TACGTTAGGG TTTGTTTTGG AATCACATTG TGACCGTCCT CGTGGGATTT GCTTCAAAAG CGGAAAACCA GAAGGGATGA TTGAGTTTCC TTGGAATGAT CTGTTAAGAG CGCATTCTCT AGCGTCTGGT AGGTTTCTCG GTAAGCAAGT GAGTGTGTTT GCTTCGGTTA CACCCCCAGT TCAAGCGCCC TACTTGCTGA GATTTGTACC GGATCGAGTT ACAGATGATT CAGGTGCTAT GATATCTGAT TCAGTTCAAA GAACAAATAA CTTCCGACCT CAAGAAGGAA GATGGCTTAC CCGGACTGTG CTTGATCACG CAGGACGGGA ATGCTTTGTT ATCCGCATTC GCGTTGGGAA GGGAGTGTTT AAACGCGGAA GTGAAGTTCC ATCCCCGGTG AAGTCAGAGG AGCGGATAAC AGAGATTCGA GTAGGTGCTT GGTCTTATCT CGAGGGTTCA ATCGGTAAAG CTCCAGCGAA GGTGGTTGGA ACCGTGACGC CTAAGGAACC AGTGGAGGAT TGGGAGGCTG CTTGGGAATT TTCAACTGGA GACGAATTGT GCATCCGTTG GGACGCATCA GGAACCATCT CAGAACTTGG TTTATATTCA AGAAACCCGG GTTCGCTGGT TCGGCTATTA ACTGGACGGA GAATGCAGTA TAAAGGAGAA GATGAAGAAG ACGACGAGGG TTTTATAACA GTGGTTAGAT CAACAGAAGA AGATCCAACA GAAAAAGCAA CTGCTCTCAT CGACTGGAAG CATCAAGCGG TTGAATTTCT GCCTGAGGAA GACGCGGTTT TCGTCTTGCT ATTGTCGATA TCAATTCTAA GAAGTGTAAC ACAGAAAAGA AGAGAAGATG TTGGTAAATT GTTGGTACGA AAGAGGATAA CCGAAGCTAC AGGTGAACGG GATTGGGGAT CAGTAATCGT CGATGCTTCA TCAACAAATG TATCTTCTTC TTCAAGTCCA TACGTAGAAC CGTGGTATCG AAACTCCAGT AAGGTTATGG CGATGGAGGA GAAATCAGCA CAAGTTGCTA GATATCCATA TCCTGTTATG AGCTATTCAA ACATTGATGG TGGCGATAAT TTGTACAAAC ACGTAATATT CGGGTGAAAC TTCAAAAAGA CAGCATTATC TTTAGTCAGA TGGATTGGTG TAACCTAAAT TAATAGGATG CTTGGGATGT CTCAATCTCT AGAAATTTAT G 
Length2401
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30078162.. 30081183
Download Sequence
A.thaliana
AGI-codeAT1G56230.1
DescriptionProtein of unknown function (DUF1399)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.0799 Ahg483326 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
30.9193 Ahg314047 Transducin/WD40 repeat-like superfamily protein
33.1059 Ahg945006 pathogenesis related homeodomain protein A
39.1152 Ahg474470 Ubiquitin domain-containing protein
40.5956 Ahg926296 short hypocotyl in white light1
43.8178 Ahg486136 DHHC-type zinc finger family protein
55.3986 Ahg903697 mitogen-activated protein kinase kinase kinase 6
57.7062 Ahg491306
57.8273 Ahg313369 phosphoenolpyruvate carboxylase 4
59.0762 Ahg491535 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression