Detail



ID : Ahg474967

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474967|fgenesh2_kg.2__97__AT1G63930.1
Sequence
TCTTCTTCTT CTTCCTCCTT CAAACAAATC ATGAGACCTG CGCAAGATAA TCAAGGCTCG TTCCTTGGCC GGATTAGTAT CCGTCGCAAC CAATTCGTCG ACGTCAACAA CGAACAAGAA CAAGAAGATC TTGAGCTTTT CCAAAAACAC ATCGCCGATC GTTTCACCGA GCTTCTTTCT CCTCCTCAAC CACCACCGTC CGATGAAACA AACACGGTAG CTTCCGTAGC TGCGACGGAG CAGATTATGT CCGTGACTTG GCTTCGTAAG CTAATGGATG TTTTCCTCTG TTGCGAAGCT GAATTCAAAG CGATTTTGTT AATGGGCCGT GACCCGACCC AGATTTCTAA ACCGCCTTTT GACCGGTTAG TTCCTGAAAT GTTAGACCGG TCAATTAAAG CGCTTGACAT TTGTACCGCC GTTGTTAACG GAATCGATTC CGTTAGACAT TACCAGCGTT TAGCTGAGAT TGCTGTTACG GCTTTGGAGC AACGTCCGTT AGGTGACGGT AACGTGAGGA GAGCGAAACG CGCGTTGGCG AATCTCGTCG TCGCGTTGAG TCTCGAGGAT AAAGAGAATG TTAGCGGCGG AGGTGGTGGC GGCGGCGGAG GGAACAAGAC GACGGAGAGA TCGTGGTCGT TTGGTCGTCG TAGCGGTGGA TCATCGGCGG CGAGTAAAGG AGGAGCGACG ATTGGTCAGC TTAAATCGTC GTCGTGGGCG GTTGGGAGAA ATTGGTCGGC GGCGAAGCAG ATCCACGCGA TGACGGCGAA TCTAACACCG CCACGTGGCA ACGAAGCGGC GGGATTGCCT CAACCGATGT TTATAATGAG CACGGTGATG GTGTTCGTAA TGTGGGTGTT AACGGCGGCG GTTCCGTGTC AGGAGAGATC TGGATTAGCG AATCATTTAC CAGTGCCGCC GAAACATTTG AATTGGGCTC AGAGTTTGAT CGGAATCCAT GAGAAGATCG GCGATGAGTG GAAGAAGAAA GAGAAGAAAG GATCTGCTGG ATTAATGGAG GAGATGACGA GGATGGAGAA GCTTGGTCAT TCGTTGATGG AATTCGCAGA TGGATTTCAT TATCCGGCGG AGAAAGATGC TGCTGAATCT GCGGCGGCGC AAGTGGCAGA GATGGCGGAG ATATGCCGGA GAATGGAGGA AGAGCTTGTG CCGTTACAGC AACAGATCAG AGAAGTTTTT CATAGGATCG TGAGGAGTCG TGCGGAGATT CTTGAGGTGT TGGAGCAAGC CGGGAAAGTT TCGGCGCCAG TTGTGTAAAA GTTTTGAATT ATTGGGGATC AAATTCGAAG TTTTGTAATT CTTTGGGGGC TAATAGGATA TTTTATTTTC TTGGTTTCGT CTATTGTTGT TTTTTCTACT TATGGTTGGG CCTTTTAGAA CTCTGGACAG GCCCATGTCA TATGTCTTTC CTT 
Length1433
Protein Sequence
Protein Residue
Map Locationscaffold_2: 532848.. 534280
Download Sequence
A.thaliana
AGI-codeAT1G63930.1
Descriptionfrom the Czech 'roh' meaning 'corner'
TAIR curator summary
Alias[ROH1][from the Czech 'roh' meaning 'corner']
Gene coexpression
MR
MR Locus Description
32.7719 Ahg945592
42.9418 Ahg488975 Leucine-rich repeat protein kinase family protein
62.426 Ahg335836 EF hand calcium-binding protein family
76.974 Ahg359114 transposable element gene
77.4597 Ahg487214 Cytochrome P450 superfamily protein
83.4026 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
83.8749 Ahg344288
92.6607 Ahg342636 AP2/B3-like transcriptional factor family protein
98.8332 Ahg924765 PA-domain containing subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression