Detail



ID : Ahg475045

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475045|fgenesh2_kg.2__175__AT1G63030.1
Sequence
AAAGCTTCAT TTCAATTCTA TTTCGAGAAC CCTTTGTGAA CCAGATCGGA TATGGAAAAC GACGACATCA CCGTGGCGGA GATGAAGCCA AAGAAGCGTG CTGGACGGAA GATTTTCAAG GAGACACGTC ACCCAATCTA CAGAGGTGTG CGGCGTAGGA ACGGCGACAA ATGGGTCTGC GAAGTCCGTG AACCGATTCA TCAGCGCCGA GTCTGGCTCG GAACTTATCC GACGGCGGAG ATGGCGGCTC GTGCTCACGA CGTGGCGGTT CTTGCTCTGC GCGGGAGATC CGCGTGTTTG AATTTCTCTG ATTCCGCTTG GCGGTTGCCG GTGCCAGAAT CAACTGATCC AGACACGATC CGGCGTACCG CGGCCGAAGC AGCGGAGATG TTCAGGCCGC CGGAGTTTAG TACTGGAATT ACGGTTTTAC CCTCAGCCAG TGAGTTTGAC ACGTCGGATG AGGGAGTCGC CGGAATGATG ATGAGGCTCG CGGAGGAGCC GTTGATGTCG CCGCCAAGAT CGTACATTGA TATGAATACG AATATGTACG TGGAAGAAGA AATGTATTAC GAAGACTTGT CACTTTGGAG TTACTAAAAT ACGTATGTGT AATAAAACCA AAATAAAAAG TTATATATTT GCATAATAAA TGGGCATAAT GATGGGCTTA AATATGATAG GTCCAACCTA TAATGTTAAA TGTGTTTTTT GGTTTACCTA GTTTCCTAGG TATTTACTAA A 
Length741
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1142982.. 1144283
Download Sequence
A.thaliana
AGI-codeAT1G63030.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in the reduction of gibberellic acid biosynthesis. This gene is expressed in all tissues examined, but most abundantly expressed in rosette leaves and stems. Overexpression of DDF1, a putative paralog of this gene, also reduces gibberellic acid biosynthesis and makes the plants more tolerant to high-salinity levels.
Alias[ddf2][DWARF AND DELAYED FLOWERING 2]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg471409 Integrase-type DNA-binding superfamily protein
3.16228 Ahg485210 cytochrome P450, family 94, subfamily B, polypeptide 3
4.24264 Ahg949754 Integrase-type DNA-binding superfamily protein
6.9282 Ahg922473
10.247 Ahg921306 Integrase-type DNA-binding superfamily protein
10.3923 Ahg933275 cytochrome P450, family 94, subfamily C, polypeptide 1
12 Ahg495276 MATE efflux family protein
13.784 Ahg912827 jasmonate-zim-domain protein 8
13.8564 Ahg497398 cytochrome P450, family 94, subfamily C, polypeptide 1
14.1421 Ahg909901 gibberellin 2-oxidase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression