| Annotation |
|---|
| Description | jgi|Araly1|933275|scaffold_401263.1 |
| Sequence |
GTCTCTCTGT CTCATCAACA ATGTTACTAA TCATATCTTT CATCATCGTC TCCTTCTTCT TCTTCATAAT ATTCTCACTC TTTCACATAC TCTTCCTTCA AAAATTACGT TACTGCAACT GCGAGATCTG CCATGCTTAT CTCACTTCAA GCTGGAGAAA AGACTTCATC AATCTCAGTG ATTGGTACAC TCATCTTCTC CGGCGATCTC CAACGTCAAC GATCAAAGTC CACGTCTTAA ACAGTGTTAT CACAGCGAAT CCATCAAACG TTGAACATAT CCTCAAAACC CATTTCCACA GTTACCCAAA AGGCAAACAA TTCTCCGTTA TCCTTGGTGA TCTTTTAGGC CGTGGAATCT TCAATTCCGA TGGTGACACG TGGCGTTTCC AGAGAAAACT CGCGAGTTTG GAACTTGGAA GTGTTTCTGT AAGAGTTTTC GCTCATGAGA TTGTTAAGAC CGAGATCGAG ACACGTCTTC TTCCGATTTT GACTTCATTC TCCGACAATC CTGGTTCGGT TTTGGATCTA CAAGATGTGT TTAGAAGATT CTCGTTTGAT ACGATTAGTA AATTGTCATT TGGGTTTGAC CCAGATTGTC TCCGGTTACC TTTTCCGATG TCGGAATTCG CCGTCGCTTT CGATACGGCC TCGACGTTAT CGGCGAAACG AGCTTTAGCT CCGTTTCCTC TGTTATGGAA AATCAAAAGG TTTTTAAGAA TTGGTTCTGA GAAAAAGCTT AAAGAATCGA TCAATGTGAT AAACCGGTTA GCTGGTGATT TAATCAAGCA TCGGAGGTTA ACCGGTTTAA TGGGTAAAAA CGATTTGATT TCGAGATTCA TGGCGGTGGT AGCGGAGGAC GATGATGAGT ATCTCCGAGA CATCGTTGTG AATTTTCTAT TGGCGGGTCG GGATACGGTT GCTGCTGGTT TAACCGGTTT TTTCTGGTTA TTGATGCGTC ATCCGGATGT GGAGAACCGG ATTCGGGAAG AATTAGACCG GGTGATGGGG ACCGGTTTTG ACTCGGTCAC TGCACGTTGC GATGAAATGA GAGAGATGGA TTATTTGCAT GCGGCGCTTT ACGAGAGCAT GAGATTGTTT CCGCCGGTTC AATTCGATTC CAAATTTGCT TTAAACGATG ACGTTTTGTC TGATGGTACA TTTGTGAAAA GAGGGACTAG AGTCACGTAC CATGCTTATG CAATGGGTCG GATGGACCGG ATCTGGGGTC CGGATTACGA AGAGTTTAAA CCGGAGAGGT GGTTGGATAA CGAAGGAAAA TTCCGGCCCG AGAATCCGGT TAAATACCCG GTTTTTCAGG CCGGAGCTAG GGTTTGTGTC GGGAAAGAAA TGGCCATCAT GGAGATGAAA TCCATAGTCG TGGCAATCAT TAGGAGGTTC AAAACACGGC TCGCAAGTCT CGAATCAACC AAAACACTCC GGTTTGCGCC TGGTTTAACC GCGACGGTTA ATGGTGGATT GCCGGTTATG ATCCAAGAGA GGAGTCAAGA CTCATAAAAG CATTAAGTCA AGATATA |
| Length | 1537 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 11893400.. 11894936 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G27690.1 |
| Description | cytochrome P450, family 94, subfamily C, polypeptide 1 |
| TAIR curator summary | Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. |
| Alias | [CYP94C1]["cytochrome P450, family 94, subfamily C, polypeptide 1"] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.16515 |
Ahg496690 | Integrase-type DNA-binding superfamily protein |
| 10.3923 |
Ahg475045 | Integrase-type DNA-binding superfamily protein |
| 19.7484 |
Ahg497398 | cytochrome P450, family 94, subfamily C, polypeptide 1 |
| 20.7364 |
Ahg497538 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 24.0832 |
Ahg915047 | high affinity K+ transporter 5 |
| 24.98 |
Ahg473473 | HXXXD-type acyl-transferase family protein |
| 35.9444 |
Ahg487361 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 39.2046 |
Ahg496532 | cytochrome P450, family 94, subfamily B, polypeptide 1 |
| 47.3075 |
Ahg471833 | organic cation/carnitine transporter 6 |
| 76.4461 |
Ahg915045 | high affinity K+ transporter 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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