| Annotation |
|---|
| Description | jgi|Araly1|475211|fgenesh2_kg.2__341__AT1G61140.1 |
| Sequence |
CCCAACTGCT CTCTACCTTT CCTGGAAAAT TCCTTCAAAA CCCAATTCAC AAGCCTTCTT CTTCATACCT GAAAATTCTC AAATCTCTGG ATCTACTCTT CAACTTCTGA ATTTCGATTG GGTTTTCCGG TAGGTAAATT CCGTGACTTT TGGGTTTTCC GATTTAGGGT TTGTTTAATC TCTTCTCGTC CTTTCTCGGG TTAGTGATGG GTGAGGAAGG TTCAGTGTTT GGTATGGGAG ATGAATTTCA CGTTGATGAT TGTGATGGTG GTTTTGAGTT TGAAGATGAT GACGAGACTA TTGACATCGA AACGCTTTAT CGGATTCTAG ATGAGAAGCC TGATTCTGCT GAGGGTAGCC AAGAAAATTT ATCACCAGTT GGTTCATCTG CTGACGAGCT CAAGGATTCA CACTTGCAAA ATGGTTCATT TGATGAACAT GTGAAAATGG AAGCCGGGCT GAGTCCTTCA CCTGCTCATA CTTGCTCTGC AAGTCTTAAA GATTGGTTTT CGTTAAGTCA GGGTGAGCAG CCTGTGGAAA CATGTGGAGT ATCTCAATCT GAGATGACTA GTTGTAGTAT ATCGTCTAGT TTCTCTGATC ATGATGGCAA TATGATGGTC TTCAATCCTG ACACTGTTTC CAAGCAAGAT GACAAGATAA TTGATTCCAA ATTTACATCG CGCAGCCCCA CAATGGCGAC TCCATATTTT GACGATGTGC CTGGATACGG AGTGGGGTTG GGAGCCAATC ATAATTCCTC TGTCATGTCT GGTTTTTTAA ATAATTCCAA TTCTCTCAGT GACAGTGCGG ATAACTATGT CTCTTCTGCA CAAGATTGCT ACAATACAAG TGGAACATCC TTGTCAGACC ATACCCCCAA TTTTGTCCAG AATTTCGCGT TTCAGTTCTT TCCTAATAAA GAAGAAGCTG TAATTGATGT TGAGAGTGGA GTAAGTGAGT CTCAGTCGGA TGGTGCCAGC CGGATGATTT TTGATAGACA TGGCAGAGTG GATCATGGAT CTTTAGAAAG TAAACCTCCT ATTGATTTTT CTAGTGCAAG AGGGATCAGT TTCAAGTTTG AAAGTAATCC TTCAGTTTCT CCTGCCTGTG TCAAACCGTA CAACAGTTTT GACAGTCATT TAGCTGATAA TGACCTTGAC CGGCCTGATA ATTATTCAAG CAGTTTTCAG GATAATAAAG CTGTTCATGT GACGGTTAAA CCAGAGGTTG AGTCAGAGAA AGTGGTCTAC AGTTCAGTTC CAGGGGAATA TAGTGTCAGG GACGATGCTT ATGTTTCTGG AGAAACCAAT CCTTGGTGGT CTGGTGCATC AAGCTCTGCA GCCTCCTATC AAACAGATAT TGAGAAAGGA TACTCGTATA TGGCACATCA AACAGCTCTA CCTAACCAAG ACAGTGGCGA TAGAAGCTCC AATCATTTTT ATGATTCAGA TACATTTTTG CAATATGTTG CAGAAGATCC CAGCCCAGTG ACACAAAGCA ATGAGTATTT AGACTCTCAA ATTCAAGGGG GCCGTGAATA TGTTCAACCG AGGGGCATTG ATTCTAATTT CTCAAATGCC AGCTTTGAAT CAGTTCAAAG TCATTCTTCA GAATGTATAT CCGATAGTGA TGATGATTCT GACATCTGTA TAATAGAACC TATTGGCCAA TCTGCAATCC CACATCGACC TCTAGCTATG AAAAAGCCGC TAGTTTCTTC AGAATATTCT ACAGTTGGTC ATAATTACAA TCAATCTGGA GGCCTGAAGC TTCAGTCAAA TAAAGAAAAT ATGATCTTTC AAGCTGCATT GCAGGATCTC ACTCAGCCTA ATTCTGAAGC AAGTCCGCCT GATGGTGTCT TGACAGTCCC GCTTCTGAGA CATCAGCGAA TTGCATTGTC ATGGATGGCC CAGAAGGAGA CAAGTGGCTT CCCCTGTTCG GGAGGAATTC TTGCTGATGA TCAGGGTCTT GGGAAGACAG TTTCCACTAT AGCTCTTATA CTGAAGGAAA GGTCTAAACC TGCCCAAACA TGTGAAGAAA GTATGAAAAA AGAAATTTTT GACCTAGAAA GTGAGAGTGG AGAATGTGCA CCTTTAAAGA CCAGTGGAAG AAGTGAGCAT TTTGAACACT CTCAATTGCT TTCCAATGAA AACAAAGTTG GTCGAGATAG TGTGGGTAAA GTGAGGGGAA GGCCAGCTGC TGGAACGCTT GTTGTCTGTC CCACTAGTGT TATGCGGCAG TGGGCTGATG AATTACATAA GAAGGTGACT AGTGAAGCGA ATCTCTCTGT TCTGGTATAC CATGGGTCTA GTAGAACAAA GGATCCTTAT GAGTTGGCTA AATATGATGT TGTTGTTACC ACATTTTCTA TTGTAAGTAT GGAAGTTCCA AAGCAGCCTC TTGTTGATGA TGAGGACGAA GAGAAGGATG GTGTACAGGA TGGTGGAACT GCAGCTACTG GCTTTTGCTC AAACAAGAAA AGGAAATATC CTCCGGATTC TAAAAAGAGG GGCTCAAAGA AGAAGAAACA AGTTGAGTTT CTGTCTGGCC CTCTTGCGAA AGTTTCATGG TTTAGAGTTG TTCTAGATGA GGCACAGAGC ATTAAGAATT ACAAAACCCA AGTTGCAAGA GCATGCTGGG GCCTTCGTGC TAAACGGAGG TGGTGTTTGT CTGGCACTCC AATCCAGAAT TCAATCGATG ACCTCTACAG CTACTTTCGA TTCCTCAAAT ATGATCCTTA TTCTTCCTAC GTATTGTTCT GTAGCACGAT TAAGAACCCT ATAACTAGGA ACCCGGTGAA AGGATATCAG AAGTTGCAGG CTATCCTTAA AACAGTGATG CTTCGCCGAA CTAAAGGTTC ATTTCTTGAT GGGAAACCCA TAATCTCTTT ACCTCCGAAG TCCATTGAGC TGAGAAAAGT GGATTTCACT GTGGAGGAAC GTGATTTCTA CTCCAAACTA GAGGCTGAAT CTCGTACTCA ATTCAGGGAA TATGCAGAAG CCGGAACAGT GAAGCAAAAT TATGTAAATA TCTTGTTGAT GCTCTTGCGC CTTCGCCAAG CTTGTGATCA CCCTCTTCTG GTGAATGGTG AATACAGTTT TACCTGGGAA TCTTCTGTTG GATTAGCAAA GAAACAGATT CAGTCAGAAG CTTCATTAGC AATTTGTGGT ATCTGCAATG ATGCACCCGA AGATGCTGTT GTTTCAGTCT GTGGTCATGT TTTCTGTAAA CAGTGCATAT ATGAACGCCT TACTGGTGAT AATAATCACT GTCCCCTTGC AAACTGCAAT GTCAGACTCA CCATCTCATC ATTATCTTCC AAAACGAGAT CGGACGATGC TATGCCTGAC ATGCAGGATC GTGCCGCTTC GAATAGCCTT AGCCCCTGTT CTGATGAAGA TCTTCCATAT GGTTCATCTA AAATCAAGGC TGCTCTAGAG ATCTTACAAT CACTGCCCAA ACCACAGGAT TTGACAGATA CAAATCAGAT CTCTCAAAAC AGTGAATACT CCAGTCTTCC TGTAACTCCA GTTAAGAATG AGGGTATTAG CGTTGTTGTT CCGGTTAAGG TAGCTGGAGA AAAGGCCATT GTTTTTTCCC AATGGACAAA GATGCTAGAC CTACTTGAAG CTTCTCTTGT AAGTTCACAT ATTCAGTATA GAAGGCTTGA TGGAACAATG TCAGTTGCTG CTCGAGATAA AGCAGTGCAG GATTTCAACA CTCTCCCTGA GGTTACTGTA ATGATAATGT CTCTCAAGGC TGCTAGTCTT GGACTGAATA TGGTAGCAGC TTGTCATGTT CTGATGCTGG ATTTATGGTG GAACCCAACA ACCGAGGATC AAGCAATTGA TAGAGCACAT CGTATAGGAC AGACACGACC AGTAACAGTT GTTCGGTTCA CAGTAAAAGA TACAGTCGAA GATCGGATAT TAGCCCTTCA GCAAAAGAAA AGAATGATGG TAGCCTCTGC ATTTGGAGAA GATGAAAAGG GAAGCCGACA GTCTCACCTC ACCGTAGAGG ACTTGAGCTA CCTGTTTATG GCTGATTCAT GAGAATGAGC TTCAAGCTCC TTTTTGACCA ATGCGGGCGG GTACATATGA TAGGGTTTTT GTGCAGTTTT AGGAGGAAGA AACTCTTCGT TTAACTGACT ACAGGTTTGT GCAAAAGAAA GATTAGAAAA GACTATTGGG GTTTGGGATA TAAAAATAGA AAGCTGATCC GATTTGATTA TTGGTTCCAT TTAGACTTTA GGTATTGACA ATTAATGGAA GATGACAATA TACAGGAGCA TTTGCTATTG GATTTCTCAT TGTACGATCA CAATGTGATT GGTCCGGCGA GTTATTATAG CTT |
| Length | 4353 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 2474220.. 2480475 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G61140.1 |
| Description | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
| TAIR curator summary | |
| Alias | [EDA16][embryo sac development arrest 16] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg331828 | |
| 5.83095 |
Ahg338999 | Protein kinase superfamily protein |
| 9.48683 |
Ahg938459 | mitogen-activated protein kinase phosphatase 1 |
| 13.1909 |
Ahg477381 | SIN3-like 1 |
| 14.7986 |
Ahg927799 | Target of Myb protein 1 |
| 20.3961 |
Ahg478603 | nuclear factor Y, subunit C11 |
| 21 |
Ahg491024 | phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases |
| 23.2379 |
Ahg474163 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 25.4165 |
Ahg485083 | FTSH protease 7 |
| 26.7955 |
Ahg900529 | Concanavalin A-like lectin protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|