Detail



ID : Ahg478603

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478603|fgenesh2_kg.3__1304__AT3G12480.1
Sequence
TTTTATTTTT CGATCGCACG GAGATTGTAA CAAGGAAACC GCCGTCGCCG GATCTGGTAG TGAGCGTATC CATGAAGTAG ACGACGAAGC AATTACTTTC TGATCTTAAA ACGTAGTTTT TGTACAGAAG ATTCGCCCTC AATTTTTGAT CTGAAGGGTT GGGTTTACTT TTTTTTTTTT TTTTGGGTGG TGTTGCGTTT TCTCATTCGA CGGTTTCTGG ATTGGGGATA TCAAAACCAT GAGGAAGAAG CTCGATACTC GGTTCCCAGC TGCTCGTATT AAAAAGATTA TGCAAGCTGA TGAGGATGTT GGCAAGATAG CTTTGGCAGT GCCTGTCTTA GTCTCAAAAT CTTTGGAATT GTTCTTGCAA GACCTTTGCG ATCGTACATA TGAGATTACC CTTGAAAGAG GAGCCAAGAC CGTCAGCTCA TTGCACCTAA AACATTGTGT GGAAAGATAT AACGTGTTTG ATTTTCTGAG GGAAGTTGTG AGCAAGGTGC CTGACTATGG CCATTCGCAA GGGCAGGGCC ATGGTGATGT CACCATGGAT GATCGCACCA TCTCCAAGAG AAGGAAGCCC ATCAGCGATG AAGTGAATGA CAGCGACGAG GAATATAAGA AAAGCAAAAC GCAAGAGATG GTGAATGCTA AGCCCAGTGG CAGGGGTGGT AGAGGAAGAG GGCGAGGAAG AGGTCGTGGT GGACGAGCTG CAAGAGCAGC CGAAAGAGAG GGTCCCAACC GCGAGATGGA ACTAGAAGCT GCCATATCGG GACAGCCACC TCCAGAAGAC AATATCAAGA TGCATGTGTC AGAGTCATCA CCACAAGAGA ATGAGAAGAA AGACATTGAT GGCACAGTAG CATCAAACGA AGACACCAAG CAACACCTTC AAAGTCCAAA AGAAGGCATT GCCTTTGATC TCAACGCTGA ATCCCTCGAC CTAAACGAGA CCAAACTGGC ACCAACCACT GGCGCAACCA CAACCGCAGC AACAACGGAC TCAGAGGAAT ATTCGGCCTG GCCTATGATG GACATAGGCA AAATGGATCC AGCACAGCTT GCCAGTCTGG GTAAGAGGAT AGACGAGGAT GAGGAAGATT ATGACGAAGA AGGTTAAGGC ATAGCAGCAC CTTAGGATAT ATAGAGTAGC AGCATTTAGC GGTTTGTCTA GAAAATGCTT CTTCTGTCTT CAAAATCTTC TTCTAGTTTC CATTTATTGT ACGGACCAAA GATTGTATGC GCTTTATGAA ACTTAATTTT ATTCTCCTGA TATGTTATTT AAGGGTTTA 
Length1289
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4725648.. 4728170
Download Sequence
A.thaliana
AGI-codeAT3G12480.1
Descriptionnuclear factor Y, subunit C11
TAIR curator summary
Alias[NF-YC11]["nuclear factor Y, subunit C11"]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg478832 sequence-specific DNA binding transcription factors
12.2474 Ahg495111 membrin 12
12.7279 Ahg933547 high-level expression of sugar-inducible gene 2
13.0384 Ahg488026 SCP1-like small phosphatase 5
15.4919 Ahg470455 potassium channel beta subunit 1
15.9687 Ahg328336 RING/U-box superfamily protein
17.9444 Ahg474438 Protein kinase superfamily protein
20.3961 Ahg475211 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
20.567 Ahg899564
21.5639 Ahg490219 pre-mRNA splicing factor-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression