Detail



ID : Ahg475678

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475678|fgenesh2_kg.2__808__AT3G24550.1
Sequence
ATCGAAGCAA AAAGCAAAAA GCAAAAATAT CCTCGGCGCC GTCTCCAGGC ACTACTCCAT CACCATCTCC ACCATCTCCT CCTCCTTCAA ACTCAGCAAC CACCACTCCT CCTCCTTCTT CTCCTTTACC TCCTCCATCT CCTCCTGGAT CTTCCACTCC TCCTCTTCCT CAACCTTCTC CCTCCACTCC CATCACTCCA TCTCCGCCGT CTCCCACCAC TCCTGGATCA ACTAAAAGCC CTCCATCTCC AAGCTAAGGA CCACCAACCA CCCCTTCAGG ACTTACTCCT CGAACTCCAT CTACAAACCC ATCAGGGGGC TCTTCTTCTT CTTCTCCCTC GCCACCGAGT TGTTGTTGGA ATCGCCATTG GAGGTGTCGC TGTGCTTGTT TTCTTGACTT TGATTTGTCT TCTTTGTAAG AAGAAACGAA GAAGAAGACA CGATGATGAA GCTGCTTACT ATGTTCCTCC TCCTCCACCT CCTCCTGGTC CCAAAGCTGG AGGACCTTAC GGTGGACAGC AACAGTATTG GCAACAACAG AATGCATCAC AACCGTCAGA TAATCACGTA ATGCCGTCAT TGCCACCACC ACCTAAGCCT CCTTCTCCAC CACGACAACC TCCGCCGCCG CCACCACCAC CGGCATACAT GAGCAGCAGT GGAAACTCTG ACTATTCGGA TCTTCCGGTT CTTCCTCCGC CGTCTCCAGG GCTTGTGTTA GGCTTTTCCA AAAGCACTTT CACTTATGAG GAGTTGTCAA GAGCTACTAA TGGCTTCTCT GAGGCTAATT TGTTAGGACA AGGCGGGTTT GGTTATGTGC ACAAAGGTAT ATTGCCTAGT GGGAAAGAAG TTGCTGTGAA ACAGTTGAAA GCTGGGAGTG GTCAGGGAGA GAGAGAGTTT CAGGCTGAGG TCGAGATTAT TGGCAGAGTT CACCACAGGC ATTTGGTTTC TCTTATCGGT TATTGTATGG CCGGTGCTCA ACGATTGCTT GTCTATGAGT TTGTTCCCAA CAACAATCTC GAGTTTCACC TCCACGGGAA GGGAAGGCCT ACAATGGAAT GGAGCACTAG ATTGAAGATT GCTCTTGGAT CTGCTAAAGG ACTTTCATAT CTTCATGAAG ATTTATGTGC AATCCGAAAA TCATTCACCG TGATATTAAG GCAGCAAATA TACTTATGGA TTTCAAATTT TAAGCTAAGT GTTTTTGTTG CTGACTTTGG TCTTGCCAAG ATTGCTTCGG ATACAAACAC TCATGTATCT ACACGCCTGA TGGGAACCTT TGGGTATTTG GCTCCAGAAT ATGCTGCAAG CGGAAAGCTC ACAGAAAAGT CTGACGTTTT CTCATTTGGC GTTGTACTTT TGGAGCTTAT AACCGGGCGG TGCCCTGTTG ATGCAAACAA TGTCTATGTA GATGACAGCT TAGTTGACTG GGCACGACCT TTGCTTAACC GAGCATCTGA GGAAGGAGAT TTTGAGGGTT TGGCTGATTC AAAGATGGGT AACGAGTATG ACAAAGAGGA GATGGCTCGT ATGGTTGCTT GTACTGCAGC TTGTGTTCGC CATTCAGCTC GCCGTAGACC TCGCATGAGC CAGATTGTGC GTGCGTTAGA AGGAAATGTA TCGCTGTCTG ATCTTAACGA AGGGATGAGA CCAGGTCACA GCAACGTTTA CAGTTCATAT GGAGGAAGCA CAGATTACGA TACGAGCCAA TACAACGACG ACATGAAAAA GTTTAGGAAA ATGGCTCTTG GAACTCAAAG AATACGGCAC AACCGGCGAA TACACAGCGA GGGTCAAGCC ACAAGGGAAA TGGAGATGGG GAAAATTAAA AGAACCGGTC AAGGTTATAG TGGACCTTCT CTTTAAACCA TAAGAGAGGA GAAAATTGCC TTACTCTCTA ATTGACTTAC TACGATATAT GATTTGTTTT TTTTTTTTTT GGTTTGGTTT CTTCTTTAGA TGTTGTGATG TTGATTCTGG TTTTGAATAT TATTCTTTCA TTCTTTTTTT GTTTGTTATT ATGTCTTGGG CCTTTTGGCC TAGTTTGGTT AAGTTCC 
Length2057
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9470035.. 9473165
Download Sequence
A.thaliana
AGI-codeAT3G24550.1
Descriptionproline extensin-like receptor kinase 1
TAIR curator summaryencodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection.
Alias[ATPERK1][PERK1][proline-rich extensin-like receptor kinase 1]
Gene coexpression
MR
MR Locus Description
28.5132 Ahg470734 glycine-rich protein
32.9848 Ahg475633 phloem protein 2 A5
36.9053 Ahg490448 Reticulon family protein
44.7325 Ahg472755 Agenet domain-containing protein
54.4243 Ahg497161 Actin cross-linking protein
61.8708 Ahg483048 ABC2 homolog 9
63.2456 Ahg951876 Protein of unknown function (DUF569)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression