Detail


ID : Ahg475700

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475700|fgenesh2_kg.2__830__AT3G62300.1
Sequence
ATAGCTCACT TTATCTTTCG TCTCTCTTCT TCTTAGGTCT AGGGTTCTGG TGATTGTTGC TTTGGGTTTT CTGAGAGAAA CCATGTTGTT AACTACGGGA AGAAAGGAGA AGCTCTCCGT TTCTAAAGGT TCTGAAATTG AAGTCTCTTC TCAAGAGTAT GAGTATGGTA CTGGCAATGT CTGGTACTGC GCCATTCTCG AAGAAACTCT AGCTAAATCG AAGCGGAAGA AGCTCTCCGT TCGTCACTTG GATCCTCTGC TCAAGGATGA TTATTCTCCT CCGTTAATCC AAACCACCGT GCATCGTTTG ATGCGTCCAG TTCCGCCGCC GGATCCGTTT CCAGAGGTCG ATTTTGAGGA AGGTGACGTC ATTGACGCTG CTCATAAAGG TGGTTGGTGG TCTGGCTTGG TGATTAAAGT GCTGGGAAAT TGGCGTTTCT TGGTGTATCT CAGATTCCAA CCTGATGTCA TCGAGCTTCA ACGAAAGGAT CTGCGTCCGC ATTTCACTTG GAAAGATGAC GAATGGTTTC GATACGAGAA ACTACAATTG ACTGAGTCGG ATTTTAGTGC CGGAAAGTCT GTAGAAGTCA GAACCGAGGT AGACAATTTG GGTGATGTTT GGGCTCCGGC TATGGCCATT AAGGAGAATG AAGATGGGAC ATTATTGGTG AAGTTGAAGA CTTTAAGCGA TGAAGAGGTC GATTGCACCA AGATAAGCGT TTCTTATTCC AAAATCCGAC CTTCACCACT GCCTATTGGT TTAAGAGATT ACAAATTGAT GGAAAATGTG GATGCGCTTG TTGAGTCTGG ATGGTGTCCG GGTGTTGTTA GTAAAGTTCT TTTCGGGAAG AGATACGCAG TGGCTTTGGG GCCAAACAAG GAGAGTAAGG AGTTTAGCCG CTTGCAGTTA AGACCTTCTA TAGAGTGGAA AGATGGAGTT TGGCATAAAG AAGAAAAAGT TTATGATATC GAAGAGAGTT CTCATGGAGT TGAAGAAACA GCTCGTTCAA CCCGCATAAG GGTAACTGTT CGAACTGCCC TGAGAGAGAG GCATGCTTCG GCCTCAGTAA AAAATTTGAG GGCGACACGC TCTTCTAGTG GTGCTATCCA GAATATGCAG AATCCTCTTC CTGCCTCTTC CAGTGGAGAT GTTGCAGAGG CTGGTAGAGC ATCTGTCACT GTGAGTGAAA CACCGCTCTC CGTAACTGCA GCTTTATCTG GAGAATTAGG GAGTAGGATG ACTGATGTTG TGATGAATGA GAACACTCCA GTCACAAGCC AACCGGAGAT AGCAGCACCA AAAGATTTTC ACCCATCGAT AGTCCTGGGC GTAGCCGCAG CGGTCAAAAC ACAAGGAAAA ACATCTCCAA AGAAGAAACT TCAGGCAATG AAGAATCAAA AGAGCTCTAC AAATGATTCT GCTAAAGAGA AGGTGAGTGT TAATAAGAGG AAAAGAGGAC AGCCACGCAA GTTCATAAGC ACAGAGCCTA AGCAGAAGAC TGGTGTGTCT GGTAATAATT CAAAGGCTGC CACTATTGAA CATACCGATA TGACTGAGGA TGATAGGCCT CTTGCTTCAT GGATCCACGC TGGAAATTCA TCATCGGGGC AATCTGTTTC TCGGACTCCT GATCTAGGGC TTAATACAGT TGTGGAAAAG CATGTCGATG TTTTGGAAAC TCCCCCAGCG AGAGAGTCGA CAATGGTTCT ACCATTTGTA AAGAAGTCAC AGCTTTGGAA AGTCCTTGAA TCAATGGAGG TCTTCAAAAC AGTGCCACAG CGTCCACATT TCAGTCCACT GCTAGATAGC GAAGAAGAGT TCCGTGAAGG AGATGCTATT GGTACAATGG TGAAGTTTAG TTCGCTGTTA GAGAAAGTCA ACAACCTACA AGTCGACGAT CCAATAAGCT CGATTAATAG GATTGACGAG TGTTTCCTCA AGCTNNNGAA ACACGGGTTC AATGTTACAA CACCTCGATC TCGGATCGCC AAGCTATTGT CCATTAAAGA AAGGCAGACA TGCGCATTGG AAGAATTAAA AGCTGTTGAG GAAAAGATCA CAGAGAATGA CAATAAAAGA AGGAAGTATG AAGAAGATAT TGCTGAATTG CAGAGACAAG AAGTGTTGAT GAAGGAAGCA AAAGTAACAC TAGACAATGA GATAGCTCGG ATGCAGTCTC AAGCAGCTGT TCTTGACCAA AAGGTTCAGA ATGTAGATCA GGAGTTTCAG GCAATTGTCG CTACCCAATG GAAATAAGCA AGTCGTAGAT CAGACGTTTA TGTTTAAGAA TAATTGAGTT CTCTGTAAGT TG
Length2312
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9885541.. 9888765
Download Sequence
A.thaliana
AGI-codeAT3G62300.2
DescriptionDOMAIN OF UNKNOWN FUNCTION 724 7
TAIR curator summaryMember of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype
Alias[ATDUF7][DUF7][DOMAIN OF UNKNOWN FUNCTION 724 7]
Gene coexpression
MR
MR Locus Description
10.6771 Ahg496708
13.2665 Ahg486098 SET domain-containing protein
36.6879 Ahg478218 Transducin/WD40 repeat-like superfamily protein
49.2341 Ahg921086 Exocyst complex component SEC5
49.7494 Ahg473523
53.2635 Ahg948891
57.6021 Ahg487097 laccase 11
64.8999 Ahg497463 HXXXD-type acyl-transferase family protein
79.599 Ahg489694 Cellulose-synthase-like C12
85.9942 Ahg315116 Nucleotide excision repair, TFIIH, subunit TTDA
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression