Detail



ID : Ahg475919

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475919|fgenesh2_kg.2__1049__AT1G68050.1
Sequence
AGAAGAAGAA GATATTTAAA ATGGCGAGAA AACATGCGAC TGAATCGATC GGAGAAGTCA CCGGAAAACG AAAAAAACGC GGCAGAGTTG AAGAAGAAGG AGGCATCTAT GATGGAATCG AAAACCAAGA TGTAGTAGAA GATGGGAAGC TTCCATTAGA AGTGAGGATG GTCTATTACC CAGTGACTCC TCCTTCGTTC ATTGTATCCG ATGCTCTGGA GCCAGATTTT CCTTTGATCT ATGTCAACAG AGTCTTCGAA GTCTTCACTG GTTATCGTGC CGATGAAGTT CTTGGTCGTA ACTGTCGATT TTTACAGTAT AGGGATCCTC GAGCTCAAAG GCGTCACCCA TTGGTTGATC CTGTTGTTGT ATCTGAGATA AGGAGATGTC TTGAAGAAGG TATTGAATTC CAAGGAGAGC TTCTCAATTT CAGAAAGGAT GGTACTCCGT TGGTTAACAG ACTACGGCTT GCTCCAATAC GTGACGATGA TGGAACGGTT ACACATGTAA TTGGGATACA GGTCTTCTCT GAAACGACTA TAGACCTTGA GCGTGTTTCA TATCCTGTGT TCAAACATAA ACAACAGCTT GATCAGACAT CTCAGTGCTT GCTTCCAGGT GGAAGCCCGA GGTTTAAGGA GCATCATGAA GATTTCTGTG GGATATTGCA GCTGTCTGAT GAAGTCTTGG CGCATAACAT CTTATCTCGG TTAACTCCAA GAGACGTTGC TTCAATTGGT TCTGCCTGCA GGAGGTTGAG GCAGTTGACG AAAAACGAGA GCGTGAGGAA GATGGTGTGT CAGAATGCGT GGGGAAAAGA GATAACTGGA ACACTGGAGA TTATGACTAA GAAGCTAGGA TGGGGTCGGT TAGCTAGAGA GCTCACCACT CTTGAAGCTG TCTGTTGGCG CAAATTTACT GTTGGAGGGA TTGTACAACC TTCCCGCTGC AATTTCAGCG CGTGTGCTGT TGGGAACCGG CTTGTGCTAT TTGGCGGGGA AGGGGTTAAC ATGCAGCCAT TGGATGATAC TTTTGTTCTC AATCTTGATG CAGAGTATCC TGAGTGGCAA CGTGTGAGGG TGACATCCTC GCCTCCAGGA CGTTGGGGAC ACACTCTCTC GTGTCTCAAC GGGTCGTGGT TAGTAGTCTT TGGAGGGTGT GGAAGACAAG GATTGCTTAA TGACGTATTT GTGCTTGATC TAGACGCTAA GCATCCCACA TGGAAGGAAG TAGCAGGAGG AACTCCTCCA TTGCCAAGAT CTTGGCACAG CTCGTGCACC ATTGAAGGCT CTAAACTGGT TGTCTCAGGT GGCTGCACAG ACGCTGGGGT GCTTCTCAGC GACACCTTCT TGTTGGATTT GACAACAGAT AAACCGACAT GGAAAGAGAT CCCAACATCA TGGGCTCCTC CTTCTAGACT TGGGCATTCT CTATCGGTCT TTGGTCGGAC TAAAATCCTA ATGTTTGGCG GACTTGCAAA TAGCGGTCAT CTAAAGTTAA GGTCAGGGGA GGCATACACT ATAGACTTGG AGGATGAAGA ACCAAGATGG AGAGAGCTTG AGTGTAGCGC GTTCACAGGC GCAGTTGTAC CGCCTCCAAG ACTGGACCAC GTGGCTGTGA GCATGCCATG CGGTAGGGTC ATCATCTTTG GAGGGTCTAT TGCAGGGCTT CACTCTCCTT CACAACTGTT CCTTATAGAT CCTGCAGAAG AGAAACCGTC ATGGAGGATC CTGAATGCCC CGGGGAAACC ACCCAAATTA GCTTGGGGAC ATAGCACATG CGTTGTTGGA GGAACTAGAG TTTTGGTCCT TGGTGGTCAC ACTGGTGAGG AATGGATACT CAGTGAATTA CATGAACTCT GCTTGGCTAG CCGCCAAGAC TCAGATCTGT AAAGTCTCTT TCCTTCTTCA TTTGGTTTGT GGTTTTGTGT ATGTCACATT CCAAACTCTT ACTACATGTA GAAGAGATCG TGTGTACATA GTAAATTAGT GATTGTTGTG CGCTTTAGGT ATTCATGTAA TGTTAATGGT TTTGCTGTAT GAAGATCCTT TTATAGTATA CTT 
Length2063
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT1G68050.1
Descriptionflavin-binding, kelch repeat, f box 1
TAIR curator summaryEncodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.
Alias[ADO3][FKF1]["flavin-binding, kelch repeat, f box 1"]
Gene coexpression
MR
MR Locus Description
2 Ahg942000 pseudo-response regulator 5
2 Ahg481034 cold, circadian rhythm, and rna binding 2
2.23607 Ahg356828 cold regulated gene 27
2.44949 Ahg485038 Homeodomain-like superfamily protein
3.4641 Ahg496297 CCT motif -containing response regulator protein
5.19615 Ahg928106 Heavy metal transport/detoxification superfamily protein
5.47723 Ahg491275
5.65685 Ahg482064 16:0delta9 desaturase 2
5.65685 Ahg491320
5.74456 Ahg928610 metallothionein 2A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression