| Annotation |
|---|
| Description | jgi|Araly1|485038|fgenesh2_kg.5__1030__AT3G46640.2 |
| Sequence |
GTTTCACTTC TGAAAAAAAA AAAAAAAAAA TTGTTGCTCA TCATCGTCAC CAAACCAAAC TTCTCTCTTT CTCCGATCTC CGATTCGAAA TTTTCATCGA TTTTGAGCTT CAAAGACTTC AATCTCTAAC TGAATTTCAA GAAATTAGAG AGTTTAAAAT GGGAGAGGAA GTACAAATGA GCGATTACGA TGTTTCCGGC GACGGAGATA GGGTTTCTGA ATGGGAGATG GGACTACCTA GCGACGAAGA TCTAGCATCG CTCTCTTACT CTCTGATTCC GCCGAATTTG GCTATGGCGT TTAGTATCAC ACCGGAGAGA AGCCGTACGA TTCAGGATGT GAATCGTGCA TCGGAGACGA CGTTCTCCTC GCTGTGTGGC GGATCTTCCG GTCAAAATAC CTCATCGTCG AATAATAACA GCAACGCGGT GGAGGAAGAA GATCGAGTCG GATCGAGTAG TCCTGGATCG GATTCGAAGA AGCAGAAGAT ATCAGACGGC GGTGGTGGTG GCGATGGCGG TGTGGATCCA GATGCGGCGG TGGAGGAAGG AGATTCAGGA ACTGAAGATC TATCTGGGAA AACACTGAAA CGACCGCGTT TAGTGTGGAC ACCGCAGCTA CACAAGAGAT TCGTTGACGT TGTTGCTCAC TTAGGAATCA AAAACGCTGT TCCAAAGACG ATTATGCAGC TGATGAACGT TGAAGGATTA ACTCGAGAGA ACGTTGCGTC TCATCTCCAG AAATATAGGC TTTACCTCAA AAGAATGCAG GGGTTGACGA ACGAAGGTCC CTCTGCTTCG GATAAGCTCT TCTCTTCAAC ACCTGTGCCT CCACAGAGCT TCCAAGACAT CGGTGGCGGT GGCGGTAGCA GCGGTAATGT TGGAGTGCCA ATTCCAGGGC CGTATGGAGC GCAGCCGATG ATGCAGATGC CAGTTTATGC ACATCATATG GGTATGCAAG GATATCATCA TCAAAATCAT AATCATGATC CTTATCATCA GAATCATCAT CATCATCATC ATGGAGCTGG TGGAAGTGGT GCGTTTGAGG CAAATCCATA TATGATGCAG CAGAATAAGT TTGGATCCAT GGCGTCTTAT CCTTCTGTTG GTGGTGGTAG CGCGAATGAG AATTGAAATG AGTCTATAGA TGGATTCAAT GTTGGAAGAG ATAGGTTTTG ATTGTTGTTA CAGGTTCTTG GCTTCTACTT TTCTACGTCG TCACATCTTC GAAATTTTCA TCTGTGTAGG AAAGATCATA CAAACATATC ATGTCCAAGC TAGATCAAGA GAAGACCTCT GACAAATTTC ATATACTCAT TTTCTATCTT GTAAGAGATA AGTAAGTCCC TTTGCTTTAT TTGTCTGTAG ACTTCTTAGA GTGATAATCA AAAGAGTGAA TTGTTTATTT CTGTGAGAGA TGGAGTCAGA CACAATCT |
| Length | 1438 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12105270.. 12107467 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G46640.3 |
| Description | Homeodomain-like superfamily protein |
| TAIR curator summary | Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. |
| Alias | [LUX][PCL1][LUX ARRHYTHMO][PHYTOCLOCK 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg475919 | flavin-binding, kelch repeat, f box 1 |
| 5.2915 |
Ahg356828 | cold regulated gene 27 |
| 6.9282 |
Ahg481034 | cold, circadian rhythm, and rna binding 2 |
| 7.14143 |
Ahg496297 | CCT motif -containing response regulator protein |
| 8.24621 |
Ahg934787 | Protein of unknown function (DUF1313) |
| 8.3666 |
Ahg942000 | pseudo-response regulator 5 |
| 12.3288 |
Ahg950455 | CBL-interacting protein kinase 21 |
| 12.9615 |
Ahg934838 | Integrase-type DNA-binding superfamily protein |
| 13.2288 |
Ahg491275 | |
| 13.4907 |
Ahg478447 | DRE/CRT-binding protein 2B |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|