Detail



ID : Ahg476049

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476049|fgenesh2_kg.2__1179__AT1G69230.1
Sequence
TCTCTCATTG GCTCTTCTTC TTCTTGCTGA TCAGCTAAAG AATCTTTGAG AGAAGCAAGA GAGATAGAAT GGGTCGTGGA GTTAGTGCCG GTGGAGGGCA GAGTTCTTTG GGATATCTTT TTGGGAGCGG AGAGGCTCCA AAGCCAGCAA CCGTTAACAA AGCTCCAGCC GAAACCCAGT CTTCTGCTCC TGCTCCACCT CTTCAAGCCG CTGCTCCAAA GGCTGTTGAT AGCATCAAAC AAGTTCCTGC TGGTCTCAAT AGCAACTCTA CAAATAATTA CATGCGTGCA GAAGGACAGA ACACAGGCAA CTTCATTACG GACCGGCCAT CGACCAAAGT TCACTCAGCT CCAGGAGGTG GCTCGTCTCT GAATTACCTC TTTGGTGGTG GTAGCAACTA GCTATTTGAG GCAAACTTGG TCACTCTATC TTCTTTATCC CAAGTCACCC TTGTATCATT TTCGTGGAAC CTCTTGCCTC TTGGTCCCTA GCAGAATATA AAATCTGTAT AATCTCTAAA TTTCTATGTG ATTCAATTGT TGTAT 
Length545
Protein Sequence
Protein Residue
Map Locationscaffold_2: 12844336.. 12845507
Download Sequence
A.thaliana
AGI-codeAT1G69230.1
DescriptionSPIRAL1-like2
TAIR curator summarySPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.
Alias[SP1L2][SPIRAL1-like2]
Gene coexpression
MR
MR Locus Description
40.5709 Ahg342312 ERD (early-responsive to dehydration stress) family protein
46.7974 Ahg485651 peptidoglycan-binding LysM domain-containing protein
48.6826 Ahg343360
54.6077 Ahg476961 AGAMOUS-like 66
77.5371 Ahg917927 ABC2 homolog 11
95.9427 Ahg471683 Polyketide cyclase/dehydrase and lipid transport superfamily protein
96.2912 Ahg946730
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression