Detail



ID : Ahg476961

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476961|fgenesh2_kg.2__2091__AT1G77980.1
Sequence
ATGGGTCGAG TGAAATTGGA GATAAAACGA ATAGAAAACA CAACGAATCG ACAAGTTACG TTCTCAAAAA GACGTAATGG TCTGATAAAG AAAGCTTATG AATTGTCCAT TCTTTGTGAC ATCGACATTG CTCTCCTCAT GTTCTCTCCC TCCGATCGCC TTAGCCTTTT TTCCGGCAAA ACAAGGATCG AAGACGTTTT CTCAAGATAC ATCAATCTTT CTGATCAAGA ACGAGAGAAT GCTCTAGTAT TCCCCGATCA AAGCCGACGC CCAGATTTCC AGAGCAAAGA GTATCTACTC CGGACTTTGC AGCAACTCAA GACTGAGAAT GATATTGCTC TTCAACTTAC AAACCCTACA GCTATCAACT CCGACGTCGA GGAACTTGAG CATGAAGTTT ATAAGTTACA ACAACAGCTT CACATGGCAG AGGAAGAACT AAGAAAATAC GAACCAGATC CAATCAGGTT TACAACAATG GAAGAGTACG AAACTTGTGA GAAGCAGCTA ATGGATACCT TAACACGTGT CAATCAACGA CGGGAACATA TGTTGAGTCA TGATCACTTA TCTTCATACG AAGCATCTGC TATACAACAA CAGCAAAACA TGGGTGGACC TTTTGTAAAC GACGTCGTTG GGGGATGGCT GACTGAAAAT GGGCCTAACC AAGCCCATTT ATTCGACGCA TCAGCCCATT CAGCAATGTA TGAAACGTTG TTGCAAGGAA GTAGCTCAAG CTCGAACCAA AACAACATTA TGGGTGAATC CAATGTGTCA AATCATAACG GTGACATGTT CCAAGAATGG GCCCAGGCAT ATAATTCTAC TACGGCCCAT AATCCGACAA CCCTATTTCC TCCTATGCAG CATCAGCACG GATTGGTTGA TCCCAATATG GAAGAAATTG AAATCCCGGT TATGAAGAAG GAGGCACAAG CAGACCAGGA GGTCTCCGAC TATGATATAA GAATGCCTCA GCTCAGTAGC CAATAATCTC AAGGAATTTC AATTTTACCT TATCATAAAA ATTTATACGT TTTTTACAAT ATTTATACGG TTTTATTTAT TTATGATAAG ATATTACTAT ACATTTATAT AAAACACAAT TTCCACCCTT AAGGCCTTAA TTAACCTTTT ATTGACTTGC ATATTGTACA TAACGTTTCT ATTAAAAAAA AAAACCATTT TTACTCTTAA ACAATGTATA TTTTATTTAT GAAAAATAAA TAAATGGAAA ACCATGTTTT GCTCTCAAGA TTATGTCAAT TTTGCTTGTC TTAATTTTTT AAA 
Length1293
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16892726.. 16894971
Download Sequence
A.thaliana
AGI-codeAT1G77980.1
DescriptionAGAMOUS-like 66
TAIR curator summaryEncodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.
Alias[AGL66][AGAMOUS-like 66]
Gene coexpression
MR
MR Locus Description
18.3576 Ahg949069 transposable element gene
18.4932 Ahg351641 Major facilitator superfamily protein
21.166 Ahg934747 Mitochondrial glycoprotein family protein
36.2215 Ahg916592
36.6606 Ahg938540 Pre-mRNA-splicing factor 3
36.9865 Ahg480616 F-box and associated interaction domains-containing protein
40.7431 Ahg359313
41.4729 Ahg916400
43.5431 Ahg905233 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
46.0869 Ahg901222 homeobox-3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression