| Annotation |
|---|
| Description | jgi|Araly1|476492|fgenesh2_kg.2__1622__AT1G73590.1 |
| Sequence |
AACACTCACT TTACTCTTTT TTCCCTCTTC ACCACTTCTC TCCCCCAAAC TAAAGACAAA AACTCTTCTC TCATCTCTCT CTCTCTTCTC CGGCGAACAA AAGATGATAA CGGCGGCGGA TTTCTACCAC GTCATGACGG CTATGGTTCC GTTATACGTA GCCATGATCC TCGCTTACGG CTCCGTCAAA TGGTGGAAGA TCTTCACACC AGACCAATGC TCCGGCATAA ACCGTTTCGT CGCTCTCTTC GCCGTTCCTC TCCTCTCTTT CCACTTCATC GCCGCTAACA ACCCTTACGC CATGAACCTC CGTTTCCTCG CCGCAGATTC TCTCCAGAAA ATCATTGTCC TCTCTCTACT CTTCCTCTGG TGCAAACTCA GCCGCAACGG CTCGTTAGAT TGGACCATAA CTCTCTTCTC TCTCTCGACT CTTCCCAACA CTCTAGTCAT GGGGATTCCT CTACTCAAAG GCATGTACGG TGATTTCTCC GGCGACCTCA TGGTTCAAAT CGTTGTTCTT CAATGTATCA TTTGGTACAC ACTCATGCTC TTTCTCTTTG AGTACCGTGG CGCGAAGCTT TTGATCTCCG AGCAGTTTCC GGACACAGCT GGATCTATTG TTTCGATTCA TGTTGATTCC GACATTATGT CTTTAGATGG AAGACAACCT TTGGAAACTG AAGCTGAGAT TAAAGAAGAT GGGAAGCTTC ATGTTACTGT TCGTCGTTCT AATGCTTCGA GGTCTGATAT TTACTCGAGA AGGTCTCAAG GCTTATCTGC GACTCCAAGA CCTTCGAATC TAACAAACGC TGAGATTTAT TCGCTTCAGA GTTCAAGAAA CCCAACGCCT CGTGGCTCTA GCTTTAATCA TACTGATTTT TACTCTATGA TGGCTTCCGG TGGTGGTCGG AACTCTAACT TTGGTCCTGG AGAAGCTGTG TTTGGTTCTA AAGGTCCTAC TCCGAGACCC TCTAACTATG AAGAAGACGG TGGTGCTGCT AAACCGACGG CTGCTGGAAC TGCCGCTGGA GCTGGGAGGT TTCATTATCA ATCTGGAGGT AGCGGTGGTG GTGGAGGAGC GCATTATCCG GCGCCGAATC CAGGGATGTT TTCACCTAAC ACCGGCGGTG GTGGAGGTAC GGCGGCGAAA GGGAACGCTC CGGTTGTTGG TGGGAAGAGA CAAGACGGAA ACGGAAGAGA TCTTCATATG TTTGTGTGGA GCTCAAGTGC ATCTCCGGTC TCAGATGTGT TCGGCGGTGG AGGAGGAAAC CACCACGCCG ATTACGCCAC CGGTACGAAC GATCATCAAA AGGACGTTAA AATCTCTGTA CCTCAGGGGA ATAGTAACGA GAACCAGTAC GTTGAAAGGG AAGAGTTTAG TTTCGGTAAT AAAGACGATG ATAGCAAGGT GTTGGCAGCG GACGGTGGGA ACAACATAAG CAACAAAACG CCGCAGGCAA AGGTGATGCC ACCAACAAGT GTGATGACAA GACTCATTCT CATTATGGTT TGGAGGAAAC TTATCCGTAA TCCCAACTCT TACTCCAGTT TATTCGGCAT CACCTGGTCC CTCATTTCCT TCAAGTGGAA CATTGAAATG CCAGCTCTTA TAGCAAAGTC TATCTCCATA CTCTCAGATG CAGGTCTAGG CATGGCTATG TTCAGTCTTG GGTTGTTCAT GGCGTTAAAC CCAAGAATAA TAGCTTGTGG AAACAGAAGA GCAGCATTTG CGGCGGCTAT GAGATTTATC GCCGGACCTG CCGTCATGCT CGTTGCTTCT TATGCTGTTG GCCTCCGTGG CGTCCTCCTC CGTGTCGCCA TCATCCAGGC AGCTTTGCCG CAAGGAATAG TACCGTTTGT GTTCGCCAAA GAGTATAATG TGCATCCTGA CATTCTTAGC ACTGCGGTGA TATTTGGGAT GTTGATCGCG TTGCCCATAA CTCTTCTCTA CTACATTCTC TTGGGGCTGT GATGAGTGAG ATAGTTACCA AAACACAGGG ACGTTTTTTT AATCTTTTGG GGGATTATGA AATGTGAAAA GAACAATGCC CTTTTTGTTG AAAACCCACA AATTAAATCA AAACAGAGAA ATCTTCGAAG ACAATTGAAG CTCTTGAAGA ATGGAAGAAG AAGAAGACTT AGGAGCTTGG CAAGTTTTAC CTTTTTCTTA GTTTTTATGA ACATTCGTGT TTCTTCTTTT GCTAGGTTTT AGGAATTTGT AAAAGCGTTG GCTACCTTTA GTGAATTAAA AA |
| Length | 2252 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14959123.. 14962623 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G73590.1 |
| Description | Auxin efflux carrier family protein |
| TAIR curator summary | Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. |
| Alias | [ATPIN1][PIN1][ARABIDOPSIS THALIANA PIN-FORMED 1][PIN-FORMED 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg321364 | Leucine-rich repeat protein kinase family protein |
| 5.83095 |
Ahg927110 | Auxin efflux carrier family protein |
| 9.48683 |
Ahg482372 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 10.583 |
Ahg489123 | cellulose synthase-like A02 |
| 11.4891 |
Ahg482498 | poltergeist like 1 |
| 13.2288 |
Ahg487147 | |
| 13.5277 |
Ahg494911 | |
| 15.0997 |
Ahg932026 | like AUXIN RESISTANT 2 |
| 15.5885 |
Ahg335111 | ATP binding microtubule motor family protein |
| 16.9706 |
Ahg483612 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|