Detail


ID : Ahg480616

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480616|fgenesh2_kg.3__3317__AT2G17310.1
Sequence
AACAGAAGAC CTCATGGCTC TCCAAGTGAA GCTTCCATGG GAGTTGGAGG AAGACATACT CTCTCGTCTT CCACCTCAAT CTCTCGTTCG ATTCAGAACC GTCTCTAAAC AATGGAACAC TCTTTTCAAC GACAAGACTT TCATCAACAA TCATTTGTCT CGCTCCCGTC CCCAGTTCAT CCTCCTGACA ACTTCCAAGA TTTATTCCAT AGACATCATC GATCACATCA ACATCGATCC AACGATAAGG TTGCATGAGA TACCCACCTA TGATATTCGT AGCCGGGGTA CAGATTTGAA TCGCACAATT ATACGTACTT GCGATGAGTT CTTGTTTTAT AACTATCGGC ATTGGGATAA CAAGACAGCT CTCTGGAGTC CATGGTTGAG ACAGGTTAGA TGGATCGAGT ACGCGAATCA AGAGTTCTGT GTTTTCGGCT TAGGGTACGA TAATAGTAGA CCCGAAAAGG TATACAAGAT CTTGGGCCAT ATGTTTTGTC ACGGTAAAGT CTTGAGAGAT CAGAAAGTTG CGATCTACGA GTGTGCGGCT GACTCGTTGA GGTTTATTGA TAGACCTGAG GATGACGACT GGCCCATAAC TGAAGCAGCT AAACGATCAA ATGTGTCCTT GAATGGAAAT ATGTATTGGC TTGCTTGTAG TAATTATAAG ACTCATGACT ACTACATCCG AATCTTTGAT TTCTCGACGG AGAATTTCAA ACCTTTCTGT CTCCTTCCGT GTAAAAAGAA CCATGGTATT GATGGACTTA TCCTCGCGGT TTATAAGGAA GATCGGTTTT CGTTGTTAAA GCAATGCAGT GTAACGAGGG AGATTGGGAT ATGGGTAACC AAGGAGAGGA TTAGTAATAT CAATGGGAAC GGTGGGGAGG GCGTGGAGTG GATAAAGTTG ATGACCTTGT CAACAACTAA CTTGCCTAAG CTATTTGGTA AGTCTTATCC CAATAGTTAC TTCATCTATG AGAAGACATT ATACATGTGT GATGGCGACG AAGAAACTGC ATTGGCTTGC ATCTATATTG TGAGGGAAGA TCTGTGCAAG AAGATTCAAA TAGGTTCTGG AAATATTAAC TGTCGTCACT GTGTTTATAC TCCCAATTTG CTCTCGCTTC CTTTATTTAT TGGTTAGCTC TTTTCGTCTC CTTAAGCATT TTCTTCATTG TTTACTCGCC TATGGACTTT TATGTAATAT CG
Length1212
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20748726.. 20753685
Download Sequence
A.thaliana
AGI-codeAT2G17310.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summaryEncodes an F-Box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance
Alias[SON1][SUPPRESSOR OF NIM1-1 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg896275
6.08276 Ahg937786
12 Ahg936672 Protein of unknown function (DUF1216)
14.9666 Ahg351609 Protein of Unknown Function (DUF239)
15.4919 Ahg920128
16 Ahg338146 KNOX/ELK homeobox transcription factor
18.3303 Ahg949069 transposable element gene
18.7883 Ahg907924
21.3542 Ahg904884 RNA-binding protein
23.6854 Ahg358371 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression