Detail



ID : Ahg476988

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476988|fgenesh2_kg.2__2118__AT1G78200.2
Sequence
ACCAGAATTT TTAATTTTAA TTTCAGTGGA TATAAATTTC TCTCATGAAA ACGACATTAA CGAAGGAGAG CCAAAGCTTC GTCGTTTCAA AACTCAAATT CGCAAATTTC GCAGATTTAA TTCAGAATCC AAATGCCCAA GATCTGCTGT TCTCGTTCCG CTACACAAGT TGTGGTAGCA CAAAAATCAA ACTCGGGTAA AGGGAGAAAC AGTGAAGGAA GAATCAAGTA TGGATTTAGT TTGATAAAGG GGAAATCTGA CCATTCAATG GAGGATTATC ATGTTGCTAA GTTTATGAAT TTCAATGGCA ATGAATTGGG GCTTTTTGCT ATCTTTGATG GTCATAAAGG TGATAGTGTA GCTGCTTATT TGCAGAAACA CCTCTTCTCT AATATCCTCA AAGATGGAGA GTTCTTGGTT GATCCTCGAA GAGCAATTGC GAAAGCTTAT GAGAATACAG ACCAAATGAT TTTAGCAGAT AATAGAACGG ATTTAGAGAG TGGCGGTTCG ACTGCTGTGA CTGCGATTTT GATCAATGGG AAAGTTTTGT GGGTAGCTAA TGTTGGCGAT TCGCGTGCTA TTGTTTCTAG TCGAGGTAAA GCAAAACAGA TGAGTGTAGA TCATGATCCT GATGATGATA CTGAGAGGAG TATGATTGAG AGTAAAGGTG GATTTGTGAC CAACAGGCCA GGTGATGTTC CTCGAGTGAA CGGTTTGTTA GCTGTCTCTC GTGTCTTTGG TGACAAAAAC CTCAAAGCAT ATTTGAACTC AGAGCCTGAC ATTAAGGATG TAACCATTGA TAGTCACACA GATTTTCTTA TTATGGCTAG TGACGGTATT TCGAAGGTGA TGTCAAACCA AGAAGCAGTT GACATAGCTA AGAAGTTGAA AGATCCAAAG GAAGCAGCGA GGCAAGTAGT TGCTGAAGCA TTGAAAAGAA ACAGTAAGGA TGACATATCT TGCATTGTTG TCCGGTTTAG ATGATAACCA AGAAGACGCA GCTTATATTG GATTTGGAGC TTGCTTTTGC TTCACCAAGA TTATTTTGGG GTCCGGTTTA GTTCGATCTG GTTCTTCGTT ACTTGTGCAT TTTCAAGAAC AGCAGTTTAA TAGGAATATT ATTATATTAT ACTAGTTTGA CAAACCAGAT GAGTTATATC ATAAAATTTA CATGAAAAGA ATA 
Length1183
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17045557.. 17047165
Download Sequence
A.thaliana
AGI-codeAT1G78200.1
DescriptionProtein phosphatase 2C family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg491703 Tetratricopeptide repeat (TPR)-like superfamily protein
12.49 Ahg888419
18.9737 Ahg933921 Protein of unknown function (DUF3527)
19.8746 Ahg912447 Family of unknown function (DUF572)
31.5595 Ahg489620 P-loop containing nucleoside triphosphate hydrolases superfamily protein
34.5977 Ahg325092 vitamin E pathway gene 5
39.6989 Ahg473227 Galactose oxidase/kelch repeat superfamily protein
42.4971 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
44 Ahg492396 RAB geranylgeranyl transferase alpha subunit 1
51.672 Ahg355102 Family of unknown function (DUF577)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression