Detail



ID : Ahg325092

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325092|fgenesh1_pm.C_scaffold_6000312
Sequence
ATGGCTGCAA CCTTACCTCT ATCTCCGATT AGCCATCAGT TGTGTCGGTT CGGGAGCAAC GCTTTGACAA CGCATCGGTT CTGTTCGCCT AGCTTCTTGA TTTCTTCTCC TTGTTTCATC GCCTTGACCG GAATGGGCTC TGCTACTCAG TTACGTGCTC GTCGTTCTCT GATCTCTTCC GCAGTTGCGA CGAATTCGAT GTTGCATGAC GTCGGAGCCA CCGTGGCAGT GCTCGGTGGA GCTTACGCGC TTGTCTTAAG CTTCGAGAGT CTCACCAAGC GAAACGTGAT TCAACAGAGT TTGAGTAGAA AGCTTGTACA TATACTCTCA GGTCTGCTTT TCGTACTCGC GTGGCCAATC TTCAGCGGAT CGACCGAGGC TCGATACTTT GCTGCTTTCG TTCCGTTAGT TAATGGCTTA AGGCTTGTTA TTAACGGACT ATCTGTTTCC CCCAATTCTA CTCTTATCAA ATCTGTCACA AGAGAAGGGA GACCAGAAGA GTTGCTTAAA GGTCCTTTGT TCTACGTTTT AGCTCTTCTT ATCTCTGCCA TTTTCTTCTG GAGAGAGTCT CCTATCGGTA TGATCTCGTT GGCAATGATG TGCGGTGGCG ATGGAATAGC TGATATAATG GGACGAAAGT TTGGGTCAGC TAAGATACCT TACAACCCAA GAAAGAGCTG GGCAGGAAGC ATCTCCATGT TCATCTTCGG CTTCTTCATC TCCATCGCAT TACTTTACTA TTACTCAAGC CTTGGGTACC TTCACATGAA CTGGGAAACG ACCTTCCAGA GAGTCGCAAT GGTCTCAATG GTAGCTACGG TGGTCGAGTC GCTACCTATC ACAGATCAAT TAGACGACAA CGTTTCGGTT CCTCTGGCTA CTATTTTAGC TGCTTATTTA AGTTTCGGAT ATTAG 
Length915
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1456838.. 1458653
Download Sequence
A.thaliana
AGI-codeAT5G04490.1
Descriptionvitamin E pathway gene 5
TAIR curator summaryEncodes a protein with phytol kinase activity involved in tocopherol biosynthesis.
Alias[VTE5][vitamin E pathway gene 5]
Gene coexpression
MR
MR Locus Description
12.4097 Ahg494441 solute:sodium symporters;urea transmembrane transporters
15 Ahg480448 RNI-like superfamily protein
17.6635 Ahg490140 allantoinase
19.6469 Ahg476684 bifunctional nuclease in basal defense response 1
22.6936 Ahg496871 FAD-dependent oxidoreductase family protein
24.8998 Ahg481956 thylakoid processing peptide
27.6586 Ahg484422 Tetratricopeptide repeat (TPR)-like superfamily protein
31.7333 Ahg948495 Disease resistance protein (TIR-NBS-LRR class) family
31.9374 Ahg916997 YELLOW STRIPE like 3
34.5977 Ahg476988 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression