Detail



ID : Ahg477113

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477113|fgenesh2_kg.2__2243__AT1G79460.1
Sequence
CGTCACTCGT CAAGGCTAAT TCCTCGCAAG TTGCTACGAC GCCGTTTCGG TTGCTTCTGG TTTCTCCATG TCTATCAACC TCCGCTCCTC CGGTTGTTCG TCTCCGATCT CAGCTACTTT GGAAAAGAGA TTGGAAGCGG TAGATCAGAC AAGAGCTAAC AATGTGAGTT TTGAGCAAAC AAAGGACAAG ATTAGGAAGA TGTTGGATAA AGTGGAGCTT TCTGTTTCGG CCTACGATAC TAGTTGGGTA GCAATGGTTC CATCACCGAC TTCCCAAAAT GCTCCACTTT TCCCACAGTG TGTGAAATGG TTATTGGAAT ATCAACATGA AGATGGATCT TGGGGACTTG ATAATCATGA CCATCAATCT CTTAAGAAGG ATGTGTTATC ATCTACACTG GCTAGTATCC TCGCGTTAAA GAAGTGGGGA ACTGGTGAAA GACAAATAAA CAAGGGTCTC CAGTTTATTG AGCTGAATTC TGCATCAGTC ACTGATGAAA CCATACAGAA ACCAGCAGGA TTTGATATTA TATTTCCTGG GATGATTGAA TATGCTAGAG ATTTGAATCT GGCGATTCCA TTGGGCTCAG AAGTGGTGGA TGCCATGATA CGAAAAAGAG ATCTGGATCT TAAATGTGAT AGTGAAAGAT TTTCAAAGGG AAGAGAAGCA TATCTGGCCT ATGTTTTAGA GGGAACAAGA AATCTCAAAG ATTGGGATTT GATAGTCAAA TACCAAAGGA AAAATGGGTC ACTGTTTGAT TCTCCAGCCA TAACAGCAGC TGCATTTACT CAGTTTGGAA ATGATGGTTG TCTCCGTTAT CTCTGTTCTC TCCTTCAGAA ATTTGAGGCT GCAGTTCCTA CAGTTTATCC ATTTGATCAA TATGCACGCC TTAGTTTAAT TGTCACCCTT GAAAGCTTAG GAATTGATAG AGATTTCAAA ACCGAAATCA AAAGCATATT GGATGAAACC TATAGATATT GGCTTCGTGG GGATGAAGAA ATATGTTTGG AGTTGGCCAC TTGTGCTTTG GCTTTCCGAT TATTACTCGC TCATGGCTAT GATGTGTCTT ACGATCCGCT AAAACCATTT GCAGAAGAAT CTGGTTTTTC TGATACTTTG GAAGGATATG TTAAGAATAC GTTTTCTGTG TTAGAATTAT TTAAGGCTGC CCAAAGTTAT CCACATGAAT CAGCTTTGAA GAAGCAGTGT TCTTGGACTA AGCAATATCT GGAGATGGAA TTGTCCAACT GGCTTAAGAC CTCTGTTCGA GATAAATACC TCAAGAAAGA GGTCGAGGAT GCTCTTGCTT TTCCCTCCTA TGCAAGCCTA GAAAGATCAG ATCACAGGAG AAAACTACTC AATGGTTGTG TTTTTTCTGC TGTGGAAAAC ACCAGAGTTA CAAAAACCTC ATATCGTTTG CACAATATTT GCAGCTCTGG TATCCTGAAG TTAGCTGTGG ATGACTTCAA TTTCTGCCAG TCCATACACC GTGAAGAAAT GGAACGTCTT GATAGGTGGA TTGTGGAGAA TAGATTGCAG GAACTGAAAT TTGCCAGACA GAAGCTGGCC TACTGTTATT TCTCTGGGGC TGCAACTTTA TTTTCTCCAG AACTATCTGA TGCCCGTATA TCGTGGGCCA AAGGTGGAGT ACTTACAACG GTTGTAGACG ACTTCTTTGA TGTGGGAGGG TCCAAAGAAG AACTGGAAAA CCTCATACAC TTGGTCGAAA AGTGGGATTT GAACGGTGTT CCTGAGTACC GCTCAGAACA TGTTGAGATC ATATTCTCAG TTCTAAGGGA CACAATTCTC GAAACAGGAG AGAAAGCATT CATCTATCAA GGACGAAGTG TGACACACCA GATTGTGAAA ATTTGGTTGG ATCTGCTCAA GTCTATGTTG AGAGAAGCGG AGTTGTCCAG TGACAAGTCA ACACCAAGCT TGGAGGATTA CATGGAAAAT GCGTACATAT CATTTGCATT AGGACCAATT GTCCTCCCAG CTACCTATCT GATCGGTCCA CCACTTCCAG AGAAGATAGT CGATAGCCAC CAATATAAGA AGCTCTACAA GCTCGTGAGC ACTATGGGTC GTCTTCTAAA TGACATACAA GGTTTTAAGA GAGAAAGCGC GGAAGGGAAG CTGAATGCGG TTTCATTGCA CATGAGACAC GAGAGAGACA ATCGCAGCAA AGAAGAAATC ATAGAATCGA TGAAAGGTTT AGCAGAGAGA AAGAGGGAAG AATTGCATAA GCTAGTTTTG GAGGAGAAAG GAAGTGCGGT TCCAAGGGAA TGCAAAGAAG TGTTCTTGAA AATGAGCAAA GTGTTGAACC TATTTTACAG GAAGGACGAT GGGTTCACAT CAGATGATCT GATGAGTCTT GTTAAATCTG TGATCTACGA GCCTGTTACC TTACAGGAAG AATCTTTAAC TTGATCCAAG TTGATCTGGG ATGTAAACTC AGTATATGAA AATAAGACTT TGGTCTTCTT CTTT 
Length2494
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17611805.. 17615966
Download Sequence
A.thaliana
AGI-codeAT1G79460.1
DescriptionTerpenoid cyclases/Protein prenyltransferases superfamily protein
TAIR curator summaryEncodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.
Alias[ATKS][ATKS1][GA2][KS][KS1][ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE][ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE 1][GA REQUIRING 2][ENT-KAURENE SYNTHASE 1]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg485823 TRICHOME BIREFRINGENCE-LIKE 36
17.2337 Ahg471358 Vacuolar calcium-binding protein-related
18.6548 Ahg941495 nudix hydrolase homolog 24
22.4944 Ahg333720 phytochelatin synthase 2
23.0651 Ahg472556
27.5681 Ahg322589 Leucine-rich repeat protein kinase family protein
27.7489 Ahg478421 methyl esterase 17
29.6648 Ahg483030 isoamylase 1
32 Ahg317188 TatD related DNase
33.8821 Ahg915315 nudix hydrolase homolog 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression