| Annotation |
|---|
| Description | jgi|Araly1|485823|fgenesh2_kg.5__1815__AT3G54260.1 |
| Sequence |
GCTCAGTTTC CAAGTCAAAT GGCTACCTCA AACACTCGAG TCTTGTTCTT ATCTTTGTGT CTCATCCTCA GCCAAGAAGC ATTGTCTCAG TTTGATGAGC TATGGCTAGT AGGGGACGAT GATCCGCTCA ACGCGTTGCA GACAAGGCGC GAAAGAAGAG TGGAGAGGTG CGATTACTCG GTGGGGAAAT GGATATACGA TGAATCGTAT CCGCTTTATG ACTCAAGCTG TCCATATCTG AGCTCTGCGC TAAGTTGCCA GAGAAATGGA AGGCCTGACT CTTATTACCA GAAATGGAGA TGGATCCCCA AGGGTTGTTC ACTACCAAGG TTTGACGCAT TGAAATTTCT GGGGAAAATG AGAGGAAGAA GAATAATGCT GGTTGGAGAT TCAATAATGA GAAACCAGTG GGAATCTCTT GTCTGCTTAG TACAGTCTGT GATTCCCACT CATCGTAAGA AGCTCACTTA CAATGGTCCT ACAATGTCTT TCCATTCTCT GGATTTTGAG ACATCAATTG AGTTTTGTTG GGCTCCTCTG CTTGTGGAAC TCAAGAGAGG AGTTGATCGT AAAAGGGTGT TACATTTGGA CTCAATCGAA GACAATGCTA GATATTGGCG TGGTGTTGAT GTTCTTGTAT TCGATTCCGC TCACTGGTGG ACTCACTCTC AGAAATGGAG TTCGTGGGAT TATTACATGG ATGGGAATAA GGTCTTCAAA GCTATGGACC CAATGGTTGC TTATGAGAGA GGACTAACCA CATGGGCTAA ATGGGTTGAG ATAAATCTTG ATCCATCCAA AACCAAAGTC ATTTTCCGCA CTGTCTCACC GAGAGAAAGT GGTCAAATGT GCTACAACCA GAAACATCCC TTGCCTTCTT TATCCTCTTC TAGCAAACCA CACGTGCCTC AGCAGTCAAG AGTGTTGAAC AAAGTGCTTA GCAAAATGAA ATATCGAGTG TATTTGCACG ATATCACAAC GATGTCGGCG TATAGGAGAG ACGGTCATCC TTCGGTGTTC AAGAGAGCAA TGCACGAGGA AGTGAAGCAC CATCGTCCTA CTGGACCTTC ATCAGATTGC AGTCACTGGT GCTTGCCTGG TGTACCGGAT ATTTGGAATG AGATGCTTTC TTCAATTATC TTAACCAATG TTGTATGAGC TAATAAGAAT CTGTTTTTAC TCATGAACCA TGGTGTTACT TTTATGAATC AGTGGTTTTT ATAT |
| Length | 1224 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15997443.. 15999449 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G54260.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 36 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL36][TRICHOME BIREFRINGENCE-LIKE 36] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.93725 |
Ahg486119 | |
| 9.38083 |
Ahg477113 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| 11.6619 |
Ahg472719 | galactosyltransferase1 |
| 19.4936 |
Ahg474782 | Heavy metal transport/detoxification superfamily protein |
| 24.454 |
Ahg925100 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 24.4949 |
Ahg479377 | plant U-box 29 |
| 29.2404 |
Ahg940652 | Glycosyl hydrolases family 31 protein |
| 37.9473 |
Ahg489527 | Galactose oxidase/kelch repeat superfamily protein |
| 37.9737 |
Ahg476030 | Prolyl oligopeptidase family protein |
| 41.0244 |
Ahg487372 | arginine-tRNA protein transferase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
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