Detail



ID : Ahg477115

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477115|fgenesh2_kg.2__2245__AT1G79480.2
Sequence
AGTAAAGTGA TCTTCTGTGA CAACGAAAGT AACCAGCTAA AGTGCGAATC TTTATGAGAA ACAGAACCTT ATATCCTTCC ACAGGTTGCC TTGCAAGGAT TCTTTGAGTT TTTTGTTTTG TTTTGGCTTC TACACATGCA CAAGACACCC ACACAAGATA TATATATATA TATATAGAAA GAGAGAGCGA AGAGACAAAT ATTTAAGCTA TCTTGGTCCT ATTTCTTTGT CTTCTTCCTC TTGAGAGTGT AGCTAATGAA GATTTAGCTT CTCTTTTGGT CTTCATCTTA AAACCATGGC ATCAAATAGA GCCTTCGCAA CCATTTGTCT TCTTCTTTGT GTAATTCTCT CAACCAACTT CTTGACTCAT TGTGTAGTAG ATGCAAGAAA AAGCGAGGGA TTTGAGAGAC AGCCAAAGAA GGTGATGATG ATCAAAGCAT TAAAGCACAC ATCATTGTTA GAGAAAATGT TGACACAACT CAATCTTGCT CAGCCTTTAG ACTATTCTTC ATCCTCCAAC ACTCAACCTT ATGGCGTTAG CACCACTCTC ACTCTACCTC CCTATGTTTC ACTTCCCCCA CTTTCAGTTC CCGGAAATGC CCCTCCTTTC TGCGTTAATC CCCCACTTAC TCCTCCTTCC ACCTCTTATC CTGGTCTTAG CCCACCTCCC GGCCCAATCA CATTACCTAA CCCACCCGAT TCCTCCTCTA ACCCGAACTC CAACCCCAAC CCACCCGAAT CATCCTCTAA CCCGAACCCA CCTGAATCAT CCTCTAATCC AAACTCAAAC CCAAACCCAC CCGAATCATC CTCTAACCCA AACCCACCGG ATTCTTCCTC TAACCCAAAC CCACCCGAAT CATCCTCTAA TCCAAACCCA CCCGTTACCG GCCCTAACCC ACCCGAATCA TCCTCTAACC CAAACCCACC AGAGTCATCC TCTAATCCAA ACCCACCCAT TACCATCCCA TACCCGCCTG AATCCTCCAG CCCAAACCCG CCAGAAACAG TTCCTAGCCC TCCAGAATCT GGTTATACAC CAGGGCCTAT TTTAGGCCCA CCTTACTCTG AACCAGGCCC ATCAACACCT ACCGGATCAA TTCCAAGTCC ATCATCGGGG TTTCTTCCCC CGATCGTCTA TCCACCGCCT ATGGCGCCAC CGTCACCGAG CGTGACTCCG ACCTCGGCTT ACTGGTGCGT AGCTAAGCCC TCGGTCCCTG ACCCAATTAT ACAAGAAGCC ATGAACTTTG CATGTGGGTC AGGAGCTGAT TGTCATTCAA TTCAGCCCAA CGGGCCTTGC TTTAAGCCTA ATACATTGTG GGCCCATGCT TCGTTCGCCT TCAATAGCTA TTGGCAACGG ACCAAAGGTA CCGGTGGCTC GTGCACGTTC GGTGGCACCG GCATGCTTGT AACCGTTGAC CCAAGCTTTA ACGGGTGCCA TTTTGATTTC TTCTGATGCA TGCATGAAGA CGAAGACATC TCTCACTTTT CACCTTTTGT TGGATACGAA TAATATCAAA TAAATTTTGA TATAATACGT TAGGTGGGTC GCTCACTTGT AAGTTGTAAC CAATTAAAGC TTATAAATAC AAATTTCCTT GGGAATGGCA TAATTTATAA ATGGGGTATG CTAAATACGT ATATTGCTTT TGC 
Length1653
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17619626.. 17621490
Download Sequence
A.thaliana
AGI-codeAT1G79480.1
DescriptionCarbohydrate-binding X8 domain superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.2047 Ahg481945 LOB domain-containing protein 13
34.0294 Ahg338146 KNOX/ELK homeobox transcription factor
37.6696 Ahg932829
48.7442 Ahg357417 Protein kinase superfamily protein
52.2972 Ahg494580 RmlC-like cupins superfamily protein
59.7495 Ahg359063 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
62.7853 Ahg358371 Pectin lyase-like superfamily protein
63.6867 Ahg493634 Domain of unknown function (DUF3444)
69.5701 Ahg338229
76.5441 Ahg341831
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression