Detail



ID : Ahg477288

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477288|fgenesh2_kg.2__2418__AT1G79810.1
Sequence
AACTTTGCCT TGTTGTCTAT TGCCGGAATT TCAAACCCTA GCCCTGCTAC ACCGCCAATG ACGCCGTCTC CGCCTCCGCC TCCAGACGAT GCTTGGATCC GCTCTTACCA CCGCTTGCTT CCTGAATCGC AGTCTCTTCT CGCTTCCCGC CGGTCAATTA TACCGGTTGC AATCTCTAGA GTGAATCAGT TTGACGCAGC ACGACTAGAT GTTGAAATGT CAGCCATGTT GAAGGAACAG CTGGTTAAGG TTTTCACTTT GATGAAGCCA GGAATGCTCT TTCAATACGA ACCAGAACTT GATGCTTTCC TTGAGTTTCT CATTTGGAGA TTCTCTATTT GGGTTGACAA ACCCACCCCC GGAAATGCTC TCATGAATCT TAGATACAGA GATGAACGAG TCGTAGCCAA AGTGTACTCT CGTATAGTCA GAACAGGACT GGAAGGACCC GGACTTACTG CTCCTCAAAA GATTTGGTAC TGTGTTGCCT CCGTTGGTGG TCAGTACCTC TTCTCCCGTT TGCAGTCATT TTCTGCTTTC CGTAGATGGG GTGATTCTGA GCAGAGACCA TTGGCTAGGC GACTTTGGAC CCTCATACAA CGAATCGAAG GCATCTACAA AGCTGCTTCT TTTCTTAACC TATTGTCATT TCTTTATACG GGAAGGTACA GGAACCTCAT TGAAAAAGCT TTAAAAGCTA GGCTTGTCTA TAGGAGTCCC CATATGAACC GATCTGTCAG CTTCGAGTAC ATGAACCGCC AACTTGTGTG GAATGAATTT TCGGAAATGC TTTTGTTGCT TCTTCCGCTG CTCAACTCTT CAGCTGTGAA GAATATTCTT AGTCCATTTG CCAAGGACAA GTCCTCAAGC ACTAAAGAGG ATACAGTGAA TTGCCCTATT TGCCAAGTGG ATCCTGCAAT TCCTTTTATT GCTCTGCCTT GTCAGCACAG GTACTGTTAC TACTGCATAA GGACCCGCTG CGCTTCAGCA GCATCGTTCC GGTGTCTTAG ATGTAACGAG CCTGTGGTTG CCATACAACG GGAAGGTGTT TCAAGTGGCA AATGAAAGGA GGTGACGAAT TGTTGAGTCA TGCCACCAAG TCTTGAAGAA TAAGCAGCTG CAATAGTGGA AGTGTAAAAA GCTAAGGCAA GCAGCCGAAA GCAGAGAAGA ATCTGATAGG CGTTCGTTTG CAAACAGGCT GTACAAAAGG GAACATCATC GATGTGATGC AGCAAAGAAA TTTAGATAGG TACATTTCTG TACATGAGTT GAGAACCTAC CAATACCATT ATTGAATGAA GTTGGGTCTT ATGTTTACTA TAAAATCAGT TGAAACGTCG GCTATACTTG AATGAATAAT ATCCATTTCC TTACATGTTG T 
Length1381
Protein Sequence
Protein Residue
Map Locationscaffold_2: 18196491.. 18199096
Download Sequence
A.thaliana
AGI-codeAT1G79810.1
DescriptionPex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein
TAIR curator summaryDominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.
Alias[ATPEX2][PEX2][TED3][ARABIDOPSIS PEROXIN 2][PEROXIN 2][REVERSAL OF THE DET PHENOTYPE 3]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg942978 Transducin/WD40 repeat-like superfamily protein
20.7846 Ahg492235 glycerol-3-phosphatase 1
24.98 Ahg313379 Plasma-membrane choline transporter family protein
32.9545 Ahg333714
39.95 Ahg481407 binding
40.694 Ahg943542 Protein kinase superfamily protein
42.7551 Ahg919332 Rho termination factor
45.5192 Ahg473343 zinc finger (C2H2 type) family protein
45.9565 Ahg320449 regulatory particle non-ATPase 13
49.8397 Ahg486522 3'-5'-exoribonuclease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression