Detail



ID : Ahg477568

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477568|fgenesh2_kg.3__269__AT3G03220.1
Sequence
ATCAAAATCT CTAAAATCAA AATTGGCATT TTCTCTCTCG AATTCTCGCC GGAGAGATGC AACGGTTTCT TCTACCTTTA CTCTTCCTTA CACTATCGCC GCCGGCGATT TCTCATTACT CTTCCTCAAC CTCTTCTCCT TCTTCTTCAT CCGTCTCTTC CGACGCCTCA GAATGGCGTC CAGCTCGAGC CACCTACTAC GCCGCTTCTA ATCCTCGAGA CGCGGTGGGC GGTGCGTGTG GATACGGAGA TCTCGTCAAA TCTGGGTACG GTATGGCTAC GGTTGGTCTA AGCGAGACTC TGTTTGAGCG TGGTCAGATC TGTGGTGCTT GTTTCGAGCT CAGATGTGTT GATGATCTCC GTTGGTGTAT CCCTGGAACT TCAATTATTG TCACTGCTAC GAATTTCTGT GCTCCTAATT ACGGATTTGA TCCAGATGGT GGTGGTCATT GTAATCCACC GAACAAACAT TTCGTGCTTC CGATCGAAGC GTTTGAGAAG ATCGCTATTT GGAAAGCTGG GAACATGCCG GTGCAGTATC GAAGGATCAA CTGTAGAAGG GAAGGGAGCA TGCGGTTTAC AGTCGATGGT GGAGGCATTT TCATTTCGGT TCTGATCACC AATGTTGCAG GGTCCGGTGA TGTAGCTGCT GTGAAGATCA AAGGATCGAG AACCGGGTGG TTACCTATGG GTCGTAATTG GGGACAGAAT TGGCATATCA ATGCTGATCT CAAGAACCAA GCTCTCTCAT TTGAAGTAAC TTCTAGTGAC AGGTCAACCG TGACATCTTA CAACGTCTCC CCTAGAAACT GGAATTATGG ACAGACCTTC GAAGGGAAAC AATTCGAGAC TCCGTGAGAC AGAGACGGGT GCATTGAGAT ATCTCATGAT TCTTTTTTCC GGGTCAGAAT TTTTTGATGG CAAGCATATC GATCTTGGTC TAAGGTTATC TTTAGGGTTA GAAAGGAATG AACTTGGGTC AGACTTTTGC ATTTCATAGT TCTCTCTCTC CCACGCATAG GTACAAAAAT CACCAATGTA CTAAGAACAG TGATTACACA AACATCACTA TTGTATCTAT TTGTTTACAT TACTAAGGAG CGAAAGCTTC CTT 
Length1113
Protein Sequence
Protein Residue
Map Locationscaffold_3: 894039.. 895664
Download Sequence
A.thaliana
AGI-codeAT3G03220.1
Descriptionexpansin A13
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP13][ATEXPA13][ATHEXP ALPHA 1.22][EXP13][EXPA13][EXPANSIN 13][expansin A13]
Gene coexpression
MR
MR Locus Description
23.1084 Ahg919156 Pectin lyase-like superfamily protein
25.1794 Ahg912808 Protein of unknown function, DUF642
31.8748 Ahg495559 Ypt/Rab-GAP domain of gyp1p superfamily protein
33.6749 Ahg473885 Protein phosphatase 2C family protein
46.1844 Ahg494701 Leucine-rich repeat protein kinase family protein
47.4974 Ahg938625 exocyst complex component sec15A
48.4974 Ahg941166 origin recognition complex subunit 3
49.1427 Ahg936082 expansin A15
51.9615 Ahg317406 Actin-binding FH2 (formin homology 2) family protein
53.6377 Ahg483119 Basic-leucine zipper (bZIP) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression