Detail



ID : Ahg477672

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477672|fgenesh2_kg.3__373__AT3G04110.1
Sequence
AGCGAACGGT ACAAAGCTAT ACAAGAAGTT AAATGGAGAT TCTGATTTCT ATTGCCATTC TTGCTCTTCT CTTTTCCAGT GTAGTAGCTG GTCCTAACGA CGATGCTTTC GAAGAGGTTA GGGTTGGATT GGTGGTTGAC TTGAGTTCTA CACAAGGCAA GATTCTGGTA ACATCTCTTA ACTTAGCGCT TTCAGATTTC TATGGCATCA ACAATGGATA CCGAACCAGA GTCTCTATTT TGGTCAGAGA CTCCCAAGGA GACCCGATCA TTGCTCTTGC CGCCGCTACT GATCTTCTCA AAAATGCAAA AGTGGAAGCC ATTGTTGGTG CACAATCATT ACAGGAAGCA AAGCTTTTGG CGACGATTAG CGAAAAAGCT AACGTTCCGG TCATATCTAC TTTCTTGCCA AACACGTTAT CTTTGAACAA ATACGATCAC TTTATTCAAT GGACGCATGA TACGACGTCA GAGGCTAAGG GGATTATGAG TCTCATACAA GATTTCAGTT GTAAATCGGT TGTGGTTATA TACGAGGATG CTGATGACTG GAGAGAGAGT TTGCAAATAT TGGTTGAGAA TTTTCAAGAT AAAGGAATCC ATATCGCTCG TTCTGCTTCT TTTGCAGTCT CATCATCAGG AGAAAATCAT ATGATGAATC AGCTAAGGAA GCTCAAGGTA TCAAGAACAA CAGTTTTCGT GGTGCATATG TCTGAGTTTC TTGTTTCTCG TCTTTTTCGA TGCGTTGAGA AGTTAGGTTT GACGGAAGAA GGGTTTGCTT GGATCCTCAC TGTGAGAACC ATGAACTACT TGGAATATTT TGAAACAACC AGGTCAATGC AAGGGGTCAT TGGTTTCAAA CCTTACATTC CTGTATCCGA AGAAGTTACG AATTTTACTT CAAGATTGAA GAAACTTATG GGTGATGATA CAGAAACAGA GCATTCTAGT AAAATCATCG GTTTACGAGC ACACGATATA GCTTGTATTC TAGCAATTGC AGTAGAGAAG ATTAGTGTAA GAGGTAAAGC TGAAGCATCT TCGAATGTAT CAGATCTTCT TAAGACAATT AGAAATAGTA GATTCAAGGG TTTGAGTGGT GTCATCCAAA TCTCTGACAA CAAATTTATC TCAGAGACAT TTGAAATCGT GAATATTGGA AGAGAAAAAC AGAGAAGAAG ACAGATTGTT TGGCCTGGCG GGTCTCGTAA GATCCCAAGA CACCGTGTTT TGGCAGAGAA TGGTGAAAAG AAAGTGCTTA GGATCTTAGT TACCGCAGGA AACAAGGTCC CGAATCTAGT GTCGGTGCGT CCTGATCCTG AAACAGGTGT TAATACAGTC TCAGGATTCT GCGTAGAGGT TTTCAAGACT TGCATTGCTC CTTTTAACTA CGAGCTTGAA TTCATACCTT ATCGTGGAAA CAATGACAAT CTTGCTTATC TACTCTCTAC TCAGAGTGAC AAATATGATG CAGCAGTTGG TGATATCACC ATCACTTCCA ACAGATCTTT GTATGTTGAT TTTACTTTGC CTTACACAGA CATTGGTATT GGAATCTTGA CAGTAAAAAA GAAAAGCCAA GGAATGTGGA CTTTCTTTGA TCCTTTTGAA AAATCCTTGT GGCTAGCAAG TGGAGCTTTC TTCGTCTTGA CTGGGATTGT TGTTTGGTTG GTTGAACGGT CCGTTAATCC GGAATTTCAG GGCTCTTGGG GACAACAGCT TAGTATGATG CTCTGGTTTG GATTCTCTAC CATTGTGTTT GCTCACAGAG AGAAGCTACA AAAAATGTCA TCAAGATTCC TAGTCATAGT TTGGGTTTTT GTGGTGTTAA TATTGACTTC AAGTTACAGC GCAAATTTGA CATCAACCAA GACCATTTCT CGCATGCAAT TAAATCATCA GATGGTTTTC GGGGGATCTA CAACGTCAAT GACTGCGAAG CTCGGATCCA TTAATGCAGT TGAGGCATAT GCACAACTTT TACGAGATGG AACTCTTAGT CATGTCATCA ATGAAATACC GTATCTCAGT ATCCTTATCG GAAATTATCC CAATGATTTC GTAATGACTG ATAGAGTGAC TAATACCAAT GGCTTTGGCT TTATGTTCCA GAAAGGTTCG GATTTGGTTC CTAAAGTATC GCGAGAAATC GCGAAGCTAA GGTCATTGGG AATGCTGAAA GACATGGAGA AAAAATGGTT TCAAAAACTG GATTCACTAA ATGTACATTC CAACACCGAG GAAGTTGCAT CTACCATCGA CGATGATGAG GCATCTAAGC GATTCACCTT CCGAGAGTTG CGCGGTTTGT TCATCATTGC GGGAGTTGCT CATGTTCTAG TACTAGCCCT GCATCTCTTT CATATGCGTC AAGAGGTATC ACGACTATTC ACCAAACTTC AAAGCTTCTA TAAGTAAAAA GTGATCCATC ATTCATAAGC TCTAGTATAG CAACTGATCG GGAGAGGAGT GGACCAAGTC ATAAGTAACA ACAAAGCACA ACATGTAATA CTTGTTTTTC CGTAGAAATT CACATGTAAT AATTTAACTC ACGTAAATAC TAAAATTATT CACCC 
Length2575
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1286374.. 1289542
Download Sequence
A.thaliana
AGI-codeAT3G04110.1
Descriptionglutamate receptor 1.1
TAIR curator summaryputative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.
Alias[ATGLR1.1][GLR1][GLR1.1][GLUTAMATE RECEPTOR 1][glutamate receptor 1.1]
Gene coexpression
MR
MR Locus Description
21.2603 Ahg484952 homolog of Medicago truncatula MTN3
22 Ahg484262 ureide permease 2
46.551 Ahg492684 HSP20-like chaperones superfamily protein
71.9792 Ahg473111 TRICHOME BIREFRINGENCE-LIKE 38
72.7736 Ahg493041 receptor serine/threonine kinase, putative
75 Ahg929765 RING/U-box superfamily protein
75.5381 Ahg493005
94.504 Ahg494441 solute:sodium symporters;urea transmembrane transporters
97.4474 Ahg890379 purine permease 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression