| Annotation |
|---|
| Description | jgi|Araly1|478146|fgenesh2_kg.3__847__AT3G08040.1 |
| Sequence |
ACTATAAACG TTCCTTTTGC TTCCCCGATT CTTCGAAACA CTTATTGATA TCTTCAGATC CACAACAAAT TAATTACAGA GACAGTTACG AAGGAAAAGA TTTATGACGG AAACTGGTGA TGATCTTGCT ACGGTTCCAA CCAGCGTGAC CAAGTCAATC CCATTTCTTG TTATCTTCAA AGATTTAAGA CATGTATTCA GTAGGGATAC AATTGGGCGA GAGATTCTAG GCATGGCGTT TCCAACAGCT TTGGCTTTAG CTGCTGATCC AATCGCTTCT CTGATTGATA CCGCTTTTGT CGGGCGTTTA GGAGCGGCTC AGCTAGCGGC GGTTGGAGTC TCCATTGCCA TATTCAATCA AGCATCTAGA ATTACGATGT TCCCACTTGT GAGCCTCACG ACTTCGTTTG TGGCAGAGGA AGACACGATG GAGAAGATGA AAGAAGAAGC GAACAAAGCC AGTCTTGTTC ATGCAGAAAC TATACTTGTT CAAGATTCCT TGGAAAAGGG CATTTCTTCA CCTACAAGTA ACAATACCAA CCAGCCACAG CAACTCCCAG CTTTGGATAC AAAGTCAAAT AGTGGAAACA AAGCGACTAA AAAGGGGAAG AGGACCATTA GAACAGCATC AACATCTATG ATATTGGGGT TAATCCTCGG CCTTGTGCAA GCTATTTTCT TGATTTTCAG CTCCAAGTTG CTTCTAGGCT TCATGGGAGT GAAACCAAAT TCGCCAATGT TATCACCAGC ACACAAGTAC TTGAGTATAC GAGCTTTGGG GGCCCCTGCA TTGCTTCTAT CTCTTGCTAT GCAAGGCGTC TTTCGTGGCT TCAAGGATAC CAAAACTCCT CTCTTTGCCA CTGTCGTAGC AGATGTTATC AACATCGTTC TCGACCCCAT CTTCATTTTT GTGCTTCGTC TCGGGATCAG CGGTGCAGCC ATTGCCCATG TCATTTCTCA GTACTTCATG ACTCTAATAT TGTTCGTCTG CCTCGCAAAG AAAGTTAATT TGATTCCACC AAACTTCGGG GATTTGCAGT TCGGAAGGTT CCTTAAAAAT GGGATACTAT TGCTGGCGAG GACTATAGCA GTGACGTTTT GTCAGACCTT AGCAGCAGCA ATGGCGGCTC GGCTGGGTAC AACACCAATG GCTGCTTTTC AGATTTGTTT ACAAGTCTGG TTAACATCTT CTCTTCTCAA TGATGGTCTT GCCGTTGCTG GTCAGGCGAT CCTGGCTTGT TCGTTTGCTG AGAAGGACTA TAACAAAGTG ACTGCTGTTG CATCCCGTGT TCTACAGATG GGTTTTGTGT TAGGACTTGG ACTGTCCGTT TTTGTTGGAC TAGGTCTCTA CTTTGGTTCC GGAATATTCT CCAAGGACCC TGCTGTTATT CACCTCATGA CCATTGGAAT ACCGTTTATA GCAGCCACGC AGCCAATAAA CTCACTCGCC TTTGTATTGG ATGGAGTCAA TTTTGGAGCA TCTGATTTTG CTTACACTGC ATACTCCATG GTGGGAGTGG CGGCCATAAG CATTGGAGCA GTAATATATA TGGCAAAGAC CAATGGTTTC ATAGGAATAT GGATAGCTCT TACAATCTAT ATGGGTCTCC GTGCTATTAC TGGAATTGCC AGGATGGCAA CAGGAACTGG ACCGTGGAGG TTCTTGCGTG GACGATCATC CTCTTCATCT TCCTAGGACT TAGTTTATTT ATATCGAGTT GCATCTCCTT CTTCCTTCTT CGTTTTTGTT TCTGGTTCTT GTGTTTCTTT TTTTAACAGT TTTACATAAA TAATGCATAT CAAGTTATTA ATATATGGAG CCCTCACTGG CTTTTCTATC CAAATAG |
| Length | 1847 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT3G08040.1 |
| Description | MATE efflux family protein |
| TAIR curator summary | Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. |
| Alias | [ATFRD3][FRD3][MAN1][FERRIC REDUCTASE DEFECTIVE 3][MANGANESE ACCUMULATOR 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.30662 |
Ahg923731 | Leucine-rich repeat protein kinase family protein |
| 25.6905 |
Ahg351608 | Protein of Unknown Function (DUF239) |
| 39.3446 |
Ahg331706 | oligopeptide transporter 9 |
| 42.2137 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 52.4404 |
Ahg341194 | Homeodomain-like superfamily protein |
| 56.2494 |
Ahg353547 | carotenoid cleavage dioxygenase 8 |
| 58.3095 |
Ahg904968 | |
| 62.2896 |
Ahg482804 | O-fucosyltransferase family protein |
| 65.192 |
Ahg480580 | Major facilitator superfamily protein |
| 67.2607 |
Ahg904884 | RNA-binding protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|