Detail



ID : Ahg478201

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478201|fgenesh2_kg.3__902__AT3G08947.1
Sequence
ATGGAGAGGA ATTACATCAT GAAGATGGTA TGCGAGACAG CATGTTCCAA GGAGGCAGAG ATCAGACAAG CTGCTTTCGA GTGCCTTGTG TCTATTGCGT CCACATACTA CGAGGTGCTG GAGCAATACA TGCCAACACT CTTTGAGCTC ACATCGAATG CTGTAAAGGG AGATGAAGAG AGTGTTGCCC TCCAAGCAAT TGAGTTTTGG AGTTCCATCT GTGATGAAGA GATTGACCGT CAAGAGTATG ACAGTCCTGA TAGTGGTGAC TCATCCCCTC CCCACTCCTG TTTCATAGAG AAGGCTCTTC CCCATTTAGT TCAAATGTTG CTAGAAACTC TGCTGAAGCA GGAAGAGGAT CAGGACCATG ACGACGATGT CTGGAACATA TCTATGGCTG GCGGGACATG CCTTGGCCTG GTTGCCAGAA CGGTTGGAGA TGGTATAGTC CCTCTTGTGA TGCCTTTTGT TGAAAAAAAC ATAAGTTCGC CAGATTGGCG AAGCCGGGAG GCAGCCACTT ATGCTTTTGG ATCAATTTTG GAGGGCCCAA CAATTGATAA GCTTGCCCCG ATGGTTGCTG CTGGCTTGGA ATTCCTCCTT AATGCAACCA AGGATGGGAA TAACCATGTC AGGGATACAA CTGCTTGGAC TCTGAGCCGT ATCTTTGAAT TTTTGCACTC CCCAGACAGT GGCTTCTCTG TTATATCACC CGAAAACCTC CCTAGAATTG TGAGTGTATT ACTGGAATCA ATTAAAGATG TGCCAAATGT TGCAGAGAAG GTCTGCGGAG CAATATACAA TCTTGCACAG GGATATGAAG ACTCTGGAGC AAACTCCTCT CTTCTCTCTC CTTATCTCAC AGAAATCATC ACACATCTGC TTGCAGCTGC TGAGCGTACA GATGGGGCAG AGTCTAAGCT AAGAGGTGCT GCGTATGAAA CCTTGAATGA GGTTGTCCGG TGTTCAAACC TTTCAGAGGC CTCGAGCATC ATAGCGCATC TCCTCCCTGC CATCATGAAA AAATTAGCTG AAACTATGGA CCTCCCGATA ATATCAACTG ATGACCGTGA GAAACAGGCA GAACTCCAGG CTTCTCTGTG TGGTGTTCTC CAAGTCATAA TCCAGAAGCT GAGTGGCAGG GAGGATACAA AACCCATCAT AATGCAGAAC GCAGATGACA TCATGAGGCT GTTCTTAAGA GTGTTTGGAT GCCATAGTTC AAGTGTCCAC GAAGAAGCCA TGCTTGCAAT CGGTGCTCTT GCCTATGCAA CTGGAGCTGA GTTTGTGAAA TACATGCCCG AGCTTTTCAA ATATCTCCAG ATGGGGCTGC AGAACTTCGA AGAATACCAA GTCTGCTCAA TCACCGTAGG AGTGATTGGT GACATATGCC GTGCCTTGGA TGAAAAAATC CTACCTTTTT GCGATCAGAT AATGGGTCTC CTTATCCAAA ACCTTCAAAG TGGTGCACTC CACAGATCGG TGAAGCCTCC AATGTTCTCA TGCTTTGGAG ACATTGCTCT GGCGATTGGT GCTCATTTCG AAAGGTATGT TGCTCCAGCC GTTCAGATCA TGCAAGGGGC TGCTCAGGTG TGTGCGCAGA TGGACACCCT TGACGAGGAG CTTATGGATT ATGCAAACCA ACTCCGGAGA AGCATCTTTG AAGCATACTC CGGAATACTA CAGGGGTTCA AGGATACAAA AGCCGAGCTC ATGATGCCCT ACGCTCAACA TCTCTTGCAG TTTGTTGAAC TAGTATCCAA AGATTCCCTG AGGGATGAGA GCGTGACAAA AGCCACGGTT GCAGCAATGG GTGATCTTGC GGATGTTGTA GGGGAGAACA CGAAGCAGCT GTTCAAAAAC TTCACCTTCT 
Length1870
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3312933.. 3314901
Download Sequence
A.thaliana
AGI-codeAT3G08943.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.8523 Ahg887758 cobalt ion binding
48.6826 Ahg473977 Stabilizer of iron transporter SufD / Polynucleotidyl transferase
52.1344 Ahg944608 eukaryotic translation initiation factor 3K
54.3875 Ahg482933 pseudouridine synthase family protein
61.4817 Ahg919570 DNA polymerase epsilon catalytic subunit
67.8233 Ahg480841 Transducin/WD40 repeat-like superfamily protein
68.1249 Ahg470302 Eukaryotic aspartyl protease family protein
79.4984 Ahg914558 hydroxyproline-rich glycoprotein family protein
86.487 Ahg903949
95.6765 Ahg948460 decapping 5-like
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression