Detail


ID : Ahg478455

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478455|fgenesh2_kg.3__1156__AT3G11150.1
Sequence
CGCTCAGCCT CTTCCAAAGT CACATCCATC TTCCAATGGC TTCCTCTTCA GCACACCTCA GCCACCACCA ACCTTCGACC AAGCACGGTG GAGCCACGGC GGCGCCTCCG CCGACTCCGT CATGCTCACA TCTCAACACC ACCAGCAAAT CGGAGACAGC AGTCGACGCT CTCACCAGCC TTTTCCACCG TCTCCCTCCT TTGCTTTCAC TCCCCAACCG CCGCTTCTCC GACTCTGCAT CCTCCATCGC TTCTCTTCCG TTGGTATCTC TCTCCGCCGG AGATAGACGT AGCTGGGACG ATCTTATCTC CGCCGCCGTG ACTGATTTAG GCTATTTCCA ACTCACTAAC GATGACTCCG ATACTGTTTT CCCTCATGGG CTCGCTGAAG CAGCCGAGTC TGACTCACTC TCGCTCTTAG AGCTCAGTGA AGAGAAAATA GAATCGTCAT TTCCGAAGAC CTGGCCGCTG GGCTACGAAG CGGATGCTGA AACGCCATCG TTTTGCCTTG ACGCCGACTG TTCAACCGAG TCTAGCGAGT TGAATCTGAG TTCGCTCCGC GAGTTCACTC GGACTCTGGA GAAAGTTGGA CTGAAGACAG TAGAGATGCT GGCGAATGCA CTCGGATTTG GATATGACAT GACCCGGTTT AATACTCTAA TGTGGGTTAA CCAAGGTGTT CCTGATGATG AACCGGAGAT AACCAACGGA TTTTATCCTT TTGTTGTCTG TTTACAGTAT CAGATAAGGG AACAGAGGTA TTGTTTGCTA ACCGAGTCTG GTTGGGTGTC CGTTTTGCCT CGAGTTGACT CGGTTCTGGT GACGTTAGGT GACATTGCTC AGGTTTGGAG AAATGGAGAG GTCAAAAGAG TGAAATATCG ACCGGTGTTG TCTTCAGGAC AAAACGATGG TCCCAAAAAG TGTGTAACAA TGACATTGAT GCTTACACTT CCCATGGACA GTATGGTTTC ACCATTGAAA GATATGATCA GTGATGGCGA CAAAGAAGAA GAGTATGCAG AGGAGGAGGA GGAAGATGGA GGAGCAAGAA GTGATGATAA AAAGGCATTT AGGTCTTTTC GTTTCGAGGA ATACGCATGG AGAGTGTACC AAGAACGTCT CTTCTTCAGG GATCCACTGG ACAGATACAG AATCAAATCT TAGAAAGATT GATGAACTGA TGTTTGGTTT ATTTGTTTCC GGGGTTGAAT TATTTGGTAC TAGAGTTCTT GTTGTTACTA TTTTTTTTTC AGCGGATTAT TA
Length1262
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4211237.. 4213888
Download Sequence
A.thaliana
AGI-codeAT3G11150.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.9332 Ahg337771
50.5569 Ahg942510 transposable element gene
62.546 Ahg470978 plant glycogenin-like starch initiation protein 5
65.5744 Ahg930518 ammonium transporter 1;5
72.0069 Ahg900620
82.0853 Ahg332898 homeobox 53
92.4878 Ahg897639
93.0914 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
97.9285 Ahg487408 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression