Detail


ID : Ahg478720

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478720|fgenesh2_kg.3__1421__AT3G13390.1
Sequence
GAAATTCAAA CCCCAAAGCA TAATTATATA ACAATAAACA ATTAGTACCC CACCAAAACA CAAATAATCT AAAACTGTTA TCTGAGCCAA AAAAATTGTT TATTGTTATG CGAGGGGTTA AACTCTTGGC CGCGTGCCTC TACCTGGCCG CAGCCGCAAC GGTGGTGGTC CGAGCAGAAG ACCCTTACTT CCATCACGTA TGGAACGTGA CCTACGGAAC CGTGTCTCCG CTCGGCGTTC CACAACAAGT CATTCTGATC AACGGCCAAT TCCCTGGTCC CAACATCAAC TCAACCTCCA ACAACAACAT CATCATCAAT GTCTTCAACA ACCTCGACGA ACCTTTCCTC CTCACATGGA ATGGGATCCA ACACAGGAAG AACTGTTGGC AAGATGGGAC TCCAGGAACT ATGTGTCCGA TAATGCCCGG CACCAACTAC ACTTACCATT TCCAGCCTAA GGATCAGATC GGAAGCTATT TCTACTACCC CAGCACCGCC TTGCACCGTT CTGCTGGTGG ATTCGGTGGA CTCCGTGTGA ACAGCCGTCT CCTCATCCCG GTCCCTTACG CTGACCCAGA AGATGACTAC ACCGTCTTGA TCGGTGATTG GTACACTAAG AGCCACACCC AATTGAAGAA ATTCCTTGAT GGCGGTCGTA CTCTTGGCCG TCCAGATGGT ATTCTCATCA ACGGAAAGGC CGGGAAAGGC GATGGATCCG ATGCACCTCT CTTTACCTTG AGACCTGGAA AGACCTACAG GGTTAGGGTC TGTAACGTGG GTCTCAAGAC ATCTCTTAAC TTTAGGATTC AGAATCACAA GTTGAAGCTC GTTGAGATGG AAGGATCGCA CGTTCTCCAG AACGATTATG ACTCTCTCGA CGTTCACGTC GGTCAGTGTT ACGGAACCAT CCTTTCCGCT AATCAGGAAG CTAAAGATTA CTACATGGTT GCATCCTCTA GGTTCTTGAA GTCGGTTATT ACCACTACCG GTCTTCTCCG CTATGAGGGA GGAAAAGGCC CCGCTTCTTC GCAGCTACCC CCTGGTCCAG TTGGCTGGGC TTGGTCCTTG AACCAGTTCC GATCTTTCAG ATGGAACTTG ACCGCCAGTG CGGCCAGGCC TAACCCTCAG GGTTCTTACC ACTACGGAAA GATCAACATT ACACGCACCA TCAAGCTTGT GAACACTCAA GGCAAGGTCA ATGGAAAGCT CAGGTACGCG TTGAACGGAG TCTCGCACAC TGACCCTGAA ACCCCATTGA AGCTTGCCGA GTACTTTGGT GTTGCCGACA AGGTTTTCAA GTACGACAGC ATCACTGATA ACCCAACCCC AGAACAAATC AAGAGCATCA AGATCGAGCC AAATGTTCTT AACATCACTC ACCGCACCTT CATCGAGGTG GTGTTTGAGA ACCACGAGAA GAGTGTTCAG TCGTGGCACT TGGACGGTTA CTCCTTCTTT GCCGTCGCTG TCGAGCCAGG GACTTGGACT CCAGAGAAGA GAAAGAACTA CAACCTTCTG GACGCAGTGA GCAGACACAC AGTCCAAGTC TACCCAAAAT GTTGGGCAGC AATCTTGCTC ACATTCGACA ACTGTGGAAT GTGGAACATT CGATCTGAAA ACTCCGAGAG ACGTTACTTA GGACAGCAGC TTTACGCGAG TGTCTTGTCA CCAGAGAAAT CACTGAGAGA TGAATACAAC ATGCCTGAGA CAAGCCTCCA ATGTGGTCTA GTCAAGGGTA CACCTAAGCC TAATCCTTAC GCTGGAGCCT AAGTTAAATT TTACAAAAAA AAATATTTTT AATGCAACAA AATAGTTTGG ATTCTTCTGT TGATTCAATC GATTGAGAGG CATTTGCAAG ACGTTTACCC AACGGATTTA TTTTTCTGGT TTTTTGGGTC TTTTTTTTTA ATTGTTTTAC ATTTTATGAA ATTGATTTTT AAAAGTATAT GGTTTATTCG TATATACATG AAATTGAAAT GTATGTATGT CTATCCCTTA AAGTAATTTT TTTTTTCTTC TTTTAAAAAG AAGCATTAAT TTTTATCTTT TTTTGTTCTT CACTTTTTTG TAACGCGTAT GTAATGTATC CATAATCTTC AATGAAATAA GCAGAGA
Length2117
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5143883.. 5146199
Download Sequence
A.thaliana
AGI-codeAT3G13390.1
DescriptionSKU5 similar 11
TAIR curator summary
Alias[sks11][SKU5 similar 11]
Gene coexpression
MR
MR Locus Description
1 Ahg942130 Leucine-rich repeat (LRR) family protein
2.44949 Ahg945592
2.44949 Ahg930518 ammonium transporter 1;5
5.19615 Ahg895302
5.91608 Ahg929770 Protein kinase superfamily protein
7.93725 Ahg924070 SKU5 similar 12
8.94427 Ahg925744
11.4891 Ahg481945 LOB domain-containing protein 13
12 Ahg350644 Lateral organ boundaries (LOB) domain family protein
12.9615 Ahg940858 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression