| Annotation |
|---|
| Description | jgi|Araly1|478766|fgenesh2_kg.3__1467__AT3G13682.1 |
| Sequence |
ATGGATGCTC CGGCGTTAGA TGGAACGGCT CCGAGGAGGA ACAGGAGGAA AGTAAGTAGG AAGAACTACG ATGAGAATGC GATGGATGAT TTGATTGAGA AGCAATTTGG TGGAAATTCG AAGAAAAAGT ACAGGACGAA GCAAGATTTG GAGAAAGAAA CTGAGACTGA GGCTCTGATA GCTTTGTCCG TAGGTTTCCC AATCGACGAA TTGCTTGAAG AAGAGATTCG AGCTGGAGTT GTAAGAGAAT TGTGCGGGAA AGAGCAGAAC GATTACATTG TTGTTCGGAA TCATATAGTA GCTAGGTGGA GGAGTAATGT TGGGATTTGG CTACTTAAAG ATCAGATTAG AGAAACTGTG AGTAGTGACT TTGAGCATTT GATTTCAGCT GCTTATGATT TTCTCTTGTT TAATGGATAC ATCAATTTTG GGGTTTCTCC ATTGTTTGCT CCTTATATTC CTGAAGAGGG TACGGAGGGA TCAGTCATTG TTGTTGGTGC TGGTCTTGCT GGTTTGGCTG CTGCAAGACA GCTTTTGTCA TTTGGGTTTA AGGTTCTTGT TTTAGAAGGT AGGAGTCGTC CTGGTGGACG AGTGTACACT CAGAAGATGG GAGGTAAGGA TAGATTTGCA GCTGTTGAAC TCGGTGGCAG TGTAATCACG GGTTTACATG CGAACCCACT TGGTGTTCTT GCGAGACAGC TTTCTATTCC TCTTCACAAG GTTAGAGACA ACTGTCCTTT GTATAATTCA GAGGGAGCAC TTGTCGATAA GGTAGCTGAC TCCAATGTTG AGTTTGGTTT CAATAAACTG CTTGACAAGG TCACCGAAGT GAGGGAGATG ATGGAAGGGG CAGCTAAGAA GATTTCTTTG GGTGAACTAA AGATTCAGAG GAAAGAAAAC TTTTTGACTG GCATCTTGCT AACTTGGAAT ATGCTAACGC TGGGTGTCTT TCGAATCTTT CCAGCTGCTT ACTGGGATCA GGATGATCCT TACGAAATGG GTGGGGATCA TTGTTTTCTT GCTGGTGGAA ACTGGAGACT GATAAATGCA TTAGCTGAAG GGGTACCCAT AATCTATGGG AAAAGCGTTG ACACTATCAA GTATGGAGAC GGAGGAGTTG AAGTCATTTC TGGTAGCCAG ATATTTCAAG CTGACATGAT TCTTTGCACC GTGCCGCTCG GGGTCTTGAA GAAGAGATCT ATCAAGTTTG AGCCAGAGTT ACCTAGAAGA AAACAAGCAG CAATTGACAG GTTGGGGTTT GGCCTTCTGA ACAAAGTTGC CATGCTTTTC CCGTCTGTCT TTTGGGGTGA TGAGTTAGAC ACGTTTGGAT GCCTCAACGA GAGCAGCATC AACCGAGGAG AGTTCTTTCT GTTCTACGCC TACCATACAG TCTCTGGTGG CCCTGCCTTG GTTGCCTTAG TTGCTGGAGA AGCTGCTCAA CGATTTGAGT GCACAGAACC ATCTGTTTTA CTTCACCGTG TTTTGAAAAA ACTCAGAGGC ATATATGGTC CTAAAGGTGT TATTGTGCCT GACCCAATAC AGACGGTTTG CACTATATGG GGAAGTGATC CTTTGTCATA TGGGTCATAT TCTCATGTAA GGGTTGGTTC ATCTGGCGTG GACTACGACA TTCTTGCTGA AAGTGTTAGT AACCGTCTGT TCTTTGCTGG TGAGGCCACG ACAAGGCAAC ATCCAGCCAC AATGCACGGT GCCTACTTAA GCGGTTTAAG AGAAGCCTCG CAGATTCTAC ATGTTGCGAA TTATTTTCGC AGTAATCCAA AGAAACCTGT TCAAAGATAC AGTGGAGTTA ACATGAATGT TCTTGAAGAT CTGTTCAAAA GACCCGACAT TGCAACTGGG AAGTTGTCAT TTGTCTTCAA CCCATTAACC GAGGATCTGA AATCGTTTGG ATTAGTCAGA GTTTGTTTTG ACAACTTTGA AGACGATCCA ACGAATCGTC TTCAGCTTTA CAGTATTCTT TCCAGGGAGC AAGCTAACAA GATCCAAGAA TTGGACGAAA GTAGTAATGA GAGCAAACTG TCGTGTCTGA TGAATACTCT TGGATTAAAG CTAATGGGGG CCAACTCAGT ACTAGACACA GGTGGTGCGT TGATCAGTGT CATAGCTAAC GCACGCAGAG GCAGAAGCAG GACCCATGTT GTTGCAGGGC AATGCATTAT CCCTTAA |
| Length | 2187 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5297244.. 5299538 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G13682.1 |
| Description | LSD1-like2 |
| TAIR curator summary | Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA. |
| Alias | [LDL2][LSD1-like2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 61.3188 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 74.98 |
Ahg486726 | VANGUARD 1 homolog 2 |
| 79.0633 |
Ahg485917 | Pentatricopeptide repeat (PPR) superfamily protein |
| 96.1249 |
Ahg478721 | SKU5 similar 13 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|