Detail



ID : Ahg478808

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478808|fgenesh2_kg.3__1509__AT3G14000.2
Sequence
TTTCACAGTG TCCGACGATC TCAAAGCCCA AATATCAAAG TTCCTCTCTC TCTCTCTCTC TCCCCAAAAT TCGTAGCTTT TTTTGCATTT TGCTTCTGCA TTCGGCTTTG GATTTCATAA AGTGTTCAGA TTTAAGAGTG TATCTCACTC AATCTCTCTG ATAAGAGAAC CGACCCAGAG AGTTAAAAAG AAAGAGTTTT TAATGCGAAA TCGTTTCTAG GTTTGATCTG CAGATCTTGG TGCCCTAATT TTCCGCTGCC GCAACGGTCT CCTCTTTCCC TTGCCGTCAT TTTGAAGTGC GTTACTACTG TTGCAAAAAA AGGTCGAATT GAAACTCTTT AGTGAGTGAG AGAGATGCTG ACATGCATAG CTTGTTCGAA CACCAACAAT GGTGGATCTA AGAAACAAGA AGATGATGAA GAAGACGACA GAGTTATCGG AACTCCTAGG TCTAAGCAGG CGATTAAGTC CCTGACGTCA CAGATTAAAG ACATGGCAGT GAAAGCATCA GGTGCTTACA AAAGCTGCAA ACCGTGTTCT GGGTCGTCAA ACCAGAATAA GAACCGAAAC TACGCTGATT CGGATGCTGC TTCGAATTCT GGGAGGTTTC GTTATGCGTA CAAGAGAGCG GGGAGTGGTA GCTCAACACC GAAAATTTTG GGGAAGGAAA TGGAGTCAAG GTTGAAAGGT TTTTTGAGTG GAGAAGGAAC ACCTGAATCC ATGAGTGGTA GGACAGAGTC CACAGTATTC ATGGAAGAAG AAGATGAGCT CAAGGAATGG GTTGCTCAAG TGGAGCCTGG TGTCCTCATC ACATTTGTAT CATTGCCTGA GGGAGGGAAT GATATGAAGC GGATTCGTTT CAGCCGTGAA ATGTTCGATA AATGGCAAGC TCAAAAGTGG TGGGCGGAGA ATTTCGACAA GGTCATGGAA TTATACAATG TACAGCAGTT CAATCAGCAG AGCGTCCCAC TTCCAACTCC TCCTAGATCT GAAGATGGGA GCTCACGAAT TCAGTCTACC AAGAACGGTC CTGCAACTCC ACCTCTGAAC AAAGAAGGCC CTCGAGGAAA AGGCTACGCT TCTTCTGGCT CAATCGCTCA CCAAGCAACA ACCCAAACAC AAAGTCGACA CCAAGATTCA TCTGGTCTTG CTACAACGCC AAAACTCTCA AGCATAAGTG GAACCAAAAC CGAGACATCA TCTGTTGATG AGTCTGCAAG AAGTAGCTTC TCAAGGGAAG AAGAAGAAGA AGCAGATCAT TCAGGGGAGC TCTCTGTAAG TAATGCAAGT GACATTGAAA CAGAATGGGT GGAACAGGAC GAAGCCGGTG TTTACATCAC AATCAGAGCT TTACCAGATG GGACTCGCGA GCTTAGGCGC GTTCGCTTCA GCCGAGAGAA GTTTGGGGCA AGATTGTGGT GGGAGCAGAA CAGAGCTCGG ATACAACAAC AATACTTGTG ATGACCGATG ATGGTTGAAT GCTCTCTAGA GGAATCTGAC ACACCAAAAC AAAACACCTT TTTTTTTTTT TTTTATATTT TTTACTTGGA GAAAAGCTAC AGAGTGATGG AAATAACTTC GGCTTCAGAT AATGCATGCA TGTGCTTTTG GTTGGTGGTT GTTAGTTGAT CTCTTTTCTC TTCTTTCCCA TTTACATCTA TAAAGAGGTA TTAGTTTTAC TCTTTCAGTG GATTTTCTTG GTGTTATTTT 
Length1710
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5479684.. 5482748
Download Sequence
A.thaliana
AGI-codeAT3G14000.1
DescriptionDZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
TAIR curator summaryBelongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.
Alias[ATBRXL2][BRX-LIKE2]
Gene coexpression
MR
MR Locus Description
14.5602 Ahg495619 MBOAT (membrane bound O-acyl transferase) family protein
34.8568 Ahg487746 phosphatidylinositol 4-OH kinase beta2
48.5901 Ahg482381 MATE efflux family protein
49.7192 Ahg950279 P-loop containing nucleoside triphosphate hydrolases superfamily protein
53.4416 Ahg479611 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
71.9166 Ahg488794 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression