Detail



ID : Ahg478911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478911|fgenesh2_kg.3__1612__AT3G14900.1
Sequence
GGAGAAGAAA TGCTGAGTCA AGATTTATCC TTTTCTAAAA CCCTGAACCC TAGCTTCTCC TTCCGTAATT CTCCACTCAA TTCCGGCGTA CGGAGGATCG TTTCGGTTTT ACCGGTTATC ACCGAGAGGA ATTATGCTTT CAGTGTCAAA AGGTCGGAGC TTTTTCTTAG AGAAGATGGT AGATTCCGGC GAGACGTGCG GGCATTGGCG GGGAGGAGCA AGAAGAAGCT TGGAGGAGGT TCATCTGGTG GGAGAATAGA AGGAGATGCG GATATGAGGA AGCAGGTGAA GAGGAATGCT CGTGATAAAT CGAAGAAGCT AGCGGAATCT TTGTTTTATA GGTTGTATAA TAACCCTGAC AAGAGTCGGA GTCACATTCT CAGTAGTCAT CCGGATAAGT TTACGGAGGA GGAGCTTGAG ATGATTGGGC TTGGTTACGA TAGGATGGTT CGGTTTATGG ATAAGGATGA CCCGAGATTG CGTCATCCTT ATGATTGGTT TAAGTATGGA GAGTTTGGAC CTTACTCGTG GCGTGGTGTT GTGGTTGGTG ATCCGGTCCG TGGTACCATC TCTGATGAGT GTGTTACTAT GATTGGTGAA GTGGAGAATC ATGAAGAGTT TGAGAAGATT GAGCAGCATG AGATGAATAT AGCTTTTCAG AAAAGGGTTA AGGAGTTGGA TTCTAATGTT GGTTTGAGGT ATTTTTGGGT GTTTGTTAGG CATCCGAAAT GGAGACTCAG TGAGTTGCCG TGGGAGCAAT GGACGTTGGT TAGCGAAGTG GTTGTGGAAG CGGATAAGAA GCAGAGGTTG GATAAATGGA ATTTGATGGG GAGATTGGGG AACAAATCTC GGTCTTTGAT ATGTCAATGT GCGGCTTGGT TTAGACCTGA TATTGTGTAT GTGAAGAAGC CTGTGTTTCA GTGCAGGTTT GAGCCTCAAG AAGATTTTTT TAACTCGCTT ATCCCTTATC TAAACCCGGT AACGGAATCT GGATTTGTGT GTGAAGTGGA GGATGATGAA GGTAGAGTGG AGCTGAGTAC TTATTATGGA GGGTTGTGTA AGATGTTGAA GGTGAGACAG ACAGCTTTTG TGGATGATGT GGTGAATGCT TATGAGAAGT CGAGTGATGA AAAGAAGTCC AAAGTGTTGA AGTTCTTGCT TGGAAACCAC CCGAACGAGT TGTTGCATCC GTATACAAAA GAGTGGAAAG CAAAGTTGGA GGAGATGGAG CTAGGGTGTG ATGCTCCAGA TGAAAATGAG GATGAGACAA ATTTTAATGG AAACTCAGAG AAGGCTGAAT TCTCAGAATG GATTGAAGAT GAAGCTGACA ATAACGATGA TGATGGTGAG GTGGAGGAAG AAGATGATGA TGATAACATG GTTGTCGATG TGGAGGGAAA CGATGAAGAA GACAGTTTGG AAGATGAAAT AGAGGAGTCG GATCCCGAAG AGGATGAGAG GTACTGGGAA GAGCAATTCA ACAAAGCGAC AAACAACGCG GAGAGGATGG AGAAGCTTGC GGAGATGAGT ATGGTGGTGT CAGATAAGTT TTATGAGAAG CAGTTAAAGG CATTGGAGGA AAGAGAGAAG GGAGAGATTG AAGGAGATGA GTTGGAAATG AGAGGTAAGA AGGCAAAAGT GAAGCCAGAA GAGTGGAAGA CAGTAGGATA TGGAAGGTGG ATGAAGAAGA TAAAGAAGAG TAGGATCCCA CCTGAGCTGT TTCTCCGTGC TGCTGTTAGG CCTTTTGTTT ACAGAAACCT TGTCAAAGAG ATTGTTCTTA CAAGACACGC CATTTTGGAA GGCGAGATTG GTCAGAAGGA GTGATGATTA AAGAATGAAA AAGACAGTGA GTATTTGATG TATGTTAATA GCATCATAAG AGTGTAAATG AGTCGGAAAT TTGAACTTTT TTT 
Length1913
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5895204.. 5897157
Download Sequence
A.thaliana
AGI-codeAT3G14900.1
Description
TAIR curator summary
Alias[EMB3120][EMBRYO DEFECTIVE 3120]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg475311 DEA(D/H)-box RNA helicase family protein
7.14143 Ahg476044 fructokinase-like 2
7.2111 Ahg487703 P-loop containing nucleoside triphosphate hydrolases superfamily protein
8.3666 Ahg353700 DNA topoisomerase, type IA, core
8.94427 Ahg480092 Metallo-hydrolase/oxidoreductase superfamily protein
10.3923 Ahg926563 P-loop containing nucleoside triphosphate hydrolases superfamily protein
11.1355 Ahg321477 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative
13.8564 Ahg940561 mraW methylase family protein
14.3527 Ahg492444
16.4924 Ahg491238 SWIB/MDM2 domain superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression