Detail



ID : Ahg480092

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480092|fgenesh2_kg.3__2793__AT2G04530.1
Sequence
AAAGGCCGTT CTTTGCATTT TCTATCGTTT CATCTTTCAT GTCTGAGTGA AGTAGGAAAC CCCAAAAACC TCTGTAAAAC CCAGAAAATG CAGCTTTCTT CGTTTCCAAT TTCACCTTCC AAAATCTTCC CTTTCACCAA GTACCATGGC CCTCCAGTGA TTATTCACCA GCTCGCTGCA CAGATACAGA GCCACCGTAG CAATTTCGTG AGTCCTGCCA AAGTCTCTGG CTATTTCTCA TCGATTAGCC GAGCAATTGA GGAAGAAGAA GAGTATCGGA AAGCACGCGC CGCCGTTAAC CGAAAAGGCG TCGAATTGGA GAGTTATGCA ATTGAGGGGA TTTCTGTAGG TGGGCATGAG ACTTGTGTTA TCGTCCCTGA GCTCAAATGT GTGTTTGATA TTGGGAGGTG CCCTTCTCGT GCTATTCAGC AGAAGTTTCT TTTTATCACT CATGCTCATC TTGATCATAT TGGAGGGCTA CCGATGTATG TAGCGAGTCG TGGTTTATAC AATCTTGAGC CACCGAAAAT ATTCGTGCCA CCATCTATTA AAGAAGATGT TGAGAAACTT CTTGAGATTC ACAGGACTAT GGGTCAAGTA GAGCTGAATG TAGAACTTAT TCCACTCGAT GTAGGTGAAA CATATGAGTT GCGGAATGAC ATTGTTGTTA GACCGTTTGC AACTCACCAC GTTATACCGA GTCAGGGTTA TGTCATTTAC TCGGTGAGGA AGAAGCTGCA GAAGCAATAT GCTCACCTCA AAGGCAAACA GATAGAAAAG ATTAAAAAGT CTGGCGTCGA GATTACTGAC ACGATATTAT CCCCTGAGAT AGCCTTCACT GGAGATACAA CTGCAGAGTA TATGCTTGAC CCTCGTAACG CTGATGCACT GAGGGCAAAA GTTCTTATAA CCGAGGCAAC TTTCTTGGAT GAAAGTTTTA GCACTGAGCA TGCGCAGGCA CTCGGTCACA CTCATATATC TCAGATTATT GAGAATGCAA AGTGGATCCG AAGCAAAACT GTATTATTGA CGCATTTCTC ATCACGTTAC CATGTAGAGG AAATCCGCGA AGCTGTGCTT AAGTTGCAAT CAAAAGTATC CGCAAAAGTC ATTCCTCTTA CAGAAGGTTT CAGGTCAAGA TATTCTTAAA AGAGCTCGAA GGATATTGCA AGCAAAAGTA GGTATTTGAA ACATCTTTGT CTGTAATTTC TTAGGGAACT CGCTAATGTA AG 
Length1232
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12560101.. 12562222
Download Sequence
A.thaliana
AGI-codeAT2G04530.1
DescriptionMetallo-hydrolase/oxidoreductase superfamily protein
TAIR curator summaryEncodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.
Alias[CPZ][TRZ2][TRNASE Z 2]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg920821 NAP1-related protein 2
8.94427 Ahg478911
10.0499 Ahg947800 FAD/NAD(P)-binding oxidoreductase family protein
10.6771 Ahg927326 Pentatricopeptide repeat (PPR) superfamily protein
10.6771 Ahg927888 cysteine synthase 26
13.6382 Ahg482988 Radical SAM superfamily protein
13.8564 Ahg933903 heat shock protein 60-2
15.3297 Ahg494908
16.4317 Ahg937609 Nucleic acid-binding, OB-fold-like protein
19.0526 Ahg475311 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression