| Annotation |
|---|
| Description | jgi|Araly1|478977|fgenesh2_kg.3__1678__AT3G15390.1 |
| Sequence |
ATGTCTATGA TTGCAAGCTC TTCGAATAGT GATCCTGATT CAAGAAGCTT ACAAGTGCTT CTCGATGCCT TTGGTTCTCG TTTTTCGCTT GATGACATTG CTGCTGCTTA TTGCCAAGCA AGTCAGAATG TCGATGTAGC TGGTGAGATT CTCTTTGCAA TGACTGAAAA GACGCCTCAA TGTGACCACG TTGAAATGAA GAACGAAACC TCAAAACCAA GTCAGGTCTA TGTTCCCAAG GAAGTTCGAC GACAAGAGGA TAGCAAAGCC AAAGTATGGA GGCCGAAGAG AAATTCTATA TCAGTTGGTA CTGTTTCAAG TGTTATCGGT AAGGAGTATG CTAGAACCAG GCCTATATCA AATGCTCCCA GAGAAGCAAC TAAGCCAATG AAGATAGACT CAAGGGATAT TCCAGAAACT GAGATATGGA GTGAAGAAAT GCCAAAGAGT AACGAGGCAA AGATAAGCAG GGCTCCAACT GATGTGGAGG AATTTATCGT TAAGATGCTT GGAGAAGGCT TTCAAGCTAG CCAAGATGTC ATTCACCAGG TTCTTGGCGT ATGCGGATAT GATGTGAAGA AGAGTACGGA GAAACTGCTT GACTTGTCTG ATACCAAGAA ATATGCTGAT GTTGGAATTT CCAATGAAGT TGTGAGCTTT TGTTATGACT TTAAGTTTGG TTCAGAGGAA GGGCGTAATG CTAAGAATGG TCTTGAAAAG GAAGTTTTAG AAGCTTTGTT CTCAGGTACG GAAAGATATG TGGGAGAACC AAAAGTAACT CGACATTTTG GAGAAAGGAG ACCAAGAGTT GCTGGTCGTC CTGTTTTTAA ACCTCTGGAG GACCCTTTTC AAGAGAGAGT AGTTGCTGTA AAAAAATCGT CCAATACATC TAAAGAAGAT GAAGATGAAA ATGAGTTTAA GGCACATCGT AAAGCAGTAC GTGAGCATTT GAATCAGATG AAAGAATATT ATGGAGCTGC TGCAGAAGCA TTCTCCAAAG GAGAAACCGA GCGAGCACAC AGACTCGTGG AGAAGGGACA CTTTTTTGGA CAAAAAGCCC GAGAAGCGGA TGACAAATCT ATAGCAAAGA TGATTGATGT CAAGAAAGAC GATGATTCGA CTTACGAGGA GGACGAGGTA GTGACAGTGA ATGTGAATGA ACACGAAACA AAGGAAGCTC TTCGTCTTCT CAAGCGCCAA CTAAATTACT TCTCTGGCAT TTCATCTTTT AAGTACCTCA GAGTCGCATT GGGTGACAAA AAGGAAGATT TCAAGAGCAA ACGAAAGCAT ATCGTTAAGC TGCTGGAGGG AGAATCCATT GCTTGGACTG AAGAAGATAG CGGCCTCGTG ATGATGATTC GTGTTGATAA GATTGACCCC AAGAAATTGA GTTTTGCCAA GAAATAA |
| Length | 1407 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_230: 4394.. 7245 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G15390.1 |
| Description | silencing defective 5 |
| TAIR curator summary | Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing. |
| Alias | [SDE5][silencing defective 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg497335 | silencing defective 5 |
| 50.3389 |
Ahg491107 | dihydroflavonol 4-reductase-like1 |
| 58.3267 |
Ahg490142 | glucan synthase-like 1 |
| 58.9915 |
Ahg929929 | |
| 59.1439 |
Ahg337067 | AAA-type ATPase family protein |
| 61.6117 |
Ahg495072 | ferric reduction oxidase 8 |
| 63.9531 |
Ahg480739 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 83.8928 |
Ahg475658 | beta-hexosaminidase 3 |
| 87.4528 |
Ahg491951 | Wound-responsive family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|