Detail


ID : Ahg492683

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492683|fgenesh2_kg.7__2116__AT4G21880.1
Sequence
AGATTAATTA CATTAGTGCC ACTATACACA AAATCTTGCA GGGTTTATCA AACACTTCTT CCGAATGATT CATCTTCTCC GATCTCATGT AATAGGTCTT GATTCGATTT GGTTAACCTT GTAAATGTGA AGAACAATGG CTTTAAAGGC GAAGAAAAGT TTAAGCGCGC TATTTCGCTT TGCGATGAGA AACGCTGCCA AGACTGCTGA AGCCGAAGCC AAAGCCATAG CCGGAGATTC ACTGACTTCC GACACTGGAC TAGTGTCATT GAGTTTAATG CCGGACTTTC TCTCATCGCT TAAGTCTTCG GACGATTCGT CTATCACTGG ACAAGATCTT GGAGAACCGG CACTCGCGGG TCAGGTCTCG TCCGCTTTAG ATGTTAAATC TATTGGTAAT AGTCTTATTC AAGAAAGAAA TGGCGATAAT GGTTTTTCGA AGAACGCATT GGAAACCTCA GATTTCCTGA ATAGGAAAAT TGTTTCGTCG CAAAAGCCAA AACAGGCTTC ACGTGGCAGG GTGCAGACAG AGAATTATCA GAAAAAACAG TCAGAGATTA TGGAGAAGCT TGCCAAGGGC TGTGTTCGGA AGTTGGGCAC TGAGACTATG TTTGAGGTGT TGACTAAAAT GGGAAAAGAA GCGGGTGAGA AAGAATACAA TGCAATGACT AAACTTTGCA TAGAACGCGC AAGGAGAAGC AATGATGCAG AATATGCTCT TGATCAAATT GGGAAGGCTA TTGAACATCT CAAAGAAATG AGACAACTCG GATTCTCTAT AGGAGAAGGA GCTTATGGGC CTTTTTTTAA GTACTTAGTT GATATGGAAA TGGTAGAGGA ATTCCAAATT CTCAAGGATT TTATTAAGGA GGCTTGCCCT GAGTCTAGTG GGAGACTTGT CTACTATGAA ATGCTCCTTT GGATCCAAGT CAACGACGAA GAGAAGATCC ACAAACTTTG CAATACAATT GATGATAGTG GGCTTAGTTT ATCAAATTTA CAAGATGGAG TGGAGACAGT TTCAAATCTC ATATTCAGCT ATGCAACCTG CATCCCAAAT TCAACGGTAG AGGATGCCAT TTTCAAGTTT AACAAGTTGC ATGAAGAACT AGATGTCGTG CCTCCATCTA CATCTTATGA GAATCTTGTC AGTTATCTTT GTGGCTCAAA TGAGGTGGTC ACTGCTCTTG ATATAGTTGA AAATATGTGT GAAGCAGGTC TGGTAATATC GGCAAACATC CTGCACTCAT TGTTACAGGC CGTTGAGCAG ATTCTTGAGT TTAATTTGGT GCAAAGAATC TATTCAATAA TGAGCAACAA GAGTGTGAAG CCAAATAGTG AGACTTTCAG GAGATCGATA AATTTGTGCA TAAGAATCAA AGATACCTTA GAAATTAAGT ATGAATGTGC TGTTTCTCAC AGATGCAACT TTTCTCAACC TATTGGTTCC GTGCAGTTTG AAGGTGCATA TACTATGCTT GGTAATTTGA AGAATTTCAA TTTGGCACCG AACTCTAGCA TGTACAATTC TATAATGGCA GGATATTTCC GGGAGAAAAA CGTGAACAGT GCTTTAAAGG TCCTCAAGGA AATGAAAGAA GCTGATGTTA AACCTGATTC CGTGACTTTT AGCTATCTAA TAAACTATTG CGGCGAGGAG GCGACTATTG CGAAGTATTA TAAGGAGATG AAGAAAGCAG GAGTTGAAGT TAATAAGCAC GTTTACATGT CCCTTATTAA AGCATATGCA TCATGTGGAC AGTCTGAGAA GGCAAAACAG GTGCTCGTGG ACCTGGAAGT TCCGGCGAAG GATCACAATG AGCTGAAAAG TGTGCTTATA TCTGCTCTGG CATCAAATGG AAATATAACA GATGCTTTAA GTATTTATGA AGAAATGAAG AAACTCGGCT GCCCCGTAGA GCCAAAAGCT ATTATATCTC TTATAGATAA CTCTGATTCA AACGCAGAGT TGAGAACGTT GGTTGAACTC ACTCATGAGC TGCGTGATTA TAAATTTTGG ATAGATGGTT TCTTCAAAAT TATTGTGTTT GCTGTTCGCA ACAATAGATC AAGCTCTATT CTCGATTTGC TAGAGCAGAC CAAAAACCAC TTGTCCAAGG ATGACATCGC TGTGGAATAT TGGTTTGAAG AGGTGTTTAA GTCAATAGCA GAAACAGAGT CTAATGATGT GAAGCTAGGG CTGGGCTTGG TGAGTTTTAT GAAAGAAGAG CTTGAGTTAT GTCCTTCAAG AAAATGTCTA GATTTTCTTC TACATGCTTG TGTCAATGCC AAAGATAAGC AGAATGCTCT ACTGGTATGG AAAGAGTACC AATTTGCAGA ACTTCCTAGA AAGCTTTCTT CTGGTGAGAG AGTGATGTAT AATGAGTTCT TGGTTATATG GTTTCTCAGG ATGTATCAGG TTCTAGTAGC TGCAGGAGAT TCTAAAAGTG CAGAGGCATT AGTATCAAAG ATTCCTAATG ACGATAAAGA TGTCAAATGT ATAGTTAAAG AAAGCCTGAA GAAACCGGGG ATGCCCATAT TGTTCACTGT CTCAACCGCT CCTGCCCAGC TCGAGTGCCC GTCCAGGTCA CAGTTTAAGG CTACAACGAT ATCCGGTGAA GTCAGGTACG TTACCTCGTC TTGGTACAAA CCTTTCACAA AGCTCACCTT AACTCTGCTG TTTGTTTTTG AGGTGGGTGA TGTTGTACCA GATAAGTCAG ATGGAACCTC AGGTCCGATC ATTATGATCT GCACGGTTCC TAAACCATTA AGCAAGTGA
Length2779
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8415626.. 8421795
Download Sequence
A.thaliana
AGI-codeAT4G21880.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.47214 Ahg487746 phosphatidylinositol 4-OH kinase beta2
8.94427 Ahg486580 Putative endonuclease or glycosyl hydrolase
16.2481 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
18.7617 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
23.4307 Ahg916961 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
28.7228 Ahg479316 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
33.3617 Ahg477994 Pectin lyase-like superfamily protein
37.027 Ahg471749 Tetratricopeptide repeat (TPR)-like superfamily protein
39.4968 Ahg951308 Putative endonuclease or glycosyl hydrolase
39.6232 Ahg480424 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression