Detail



ID : Ahg479179

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479179|fgenesh2_kg.3__1880__AT3G17100.2
Sequence
ATGTGTATAA AAATGCGATT CTTTGCTTCA TTCCTCTTTT GTTAAAAATA AAATTTAAAA AAAAAAAAAG AAAGAGAAAG GATTCGTCTT CCTCTTCCAC ACCCTTTCTG ACACCTCATC TCTCCCACCT TCTCCTCCGT CCCGTTCCGT TCTCCATCAG ATCCTCGATT CCGATCCAAC AGTTCGATTT CAGTTTCTGA TTCTGATCTC ATCGAACCAA AACTCGCTGA GATTTGATCG GCGATTATGG ATCAGCTTCT TCATCCGACG ACGAGCTCTA GTTCCGATCG TTCTCGTCGT AAGCGGAAGA AGAAATCATC GCCGACGTCT CTTGATTCAT CTCCGTCACC ATCCACATCG TTGGAGAAAT GGAGATCGGA GAAGCAGCAA CAGATCTACT CAACGAAGCT AGTTCGTGCT TTAAAAGAGC TTCGAATCAG TCAACAACCA TCTTCGTCAT CGTCGTCTTC GGTTCCACGC GGCGGTAGAG CTGTGCGTGA AGTCGCCGAT AGAGCTTTAG CAGTTGCGGC GAGGGGTAAA ACGTTATGGA GTCGAGCGAT ACTATCGAAA GCCGTAAAAC TCAAATTCAG GAAGCAGAAA CGGCAGAGAA TCTCCAATCC GGTGACGACG ACGACGTTAA CCACCGGGAG TATCAGGTCA AAGAAACAGA GAGCGACGGT TTTGAGGCTT AAGGCTAAAG GTTTGCCAGC TGTACAGAGG AAAGTGAAAC TTCTGAGCCG GTTAGTTCCC GGTTGCCGTA AACAAACATT ACCGGTGGTT TTAGAAGAAA CTACTGATTA TATAGCTGCC ATGGAGATGC AGATTCGTAC TATGACTGCG ATTCTCTCCG CCGTCAGTTC TTCTCCTCCG CCGCCGCCGC CAGGTCATGA TGGGGGACAA ACACACATGC TTGGTTAGTT GCCCAAACTG TCCTTTTAAT TTTTTTCATT TAAAAAAAAA AAAACTGTTT TTCCATTATT ATTCTTCTCA CTGTATTGTT TGTTGTTTGA ATATTTTACT ATTCAACTTT ATTTACCATT TCATCATGTA TATCCTTATT TTCTTGAATC TCTCTGTTAC C 
Length1081
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6866925.. 6868065
Download Sequence
A.thaliana
AGI-codeAT3G17100.1
Descriptionsequence-specific DNA binding transcription factors
TAIR curator summary
Alias[AIF3][ATBS1 Interacting Factor 3]
Gene coexpression
MR
MR Locus Description
17.6635 Ahg496771 MATE efflux family protein
28.2843 Ahg481311
32.8634 Ahg471559 sec7 domain-containing protein
34.2783 Ahg481426 Sulfite exporter TauE/SafE family protein
35.7771 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
36.3318 Ahg940784 NAC domain containing protein 83
58.6515 Ahg491946 RING membrane-anchor 2
60.5062 Ahg476384 Protein of unknown function (DUF1677)
62.1369 Ahg934405 conserved peptide upstream open reading frame 52
65.0385 Ahg926057
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression