Detail



ID : Ahg479190

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479190|fgenesh2_kg.3__1891__AT3G17180.1
Sequence
ATGAATTTGA CTCTTCCGAT GAAAAAACAA AATTTTCTGC TAATCATCTC ATTATTGATA TTATTATCAT TACTTCATCA AGATTATCAC ATTGACGCTC AGAATTCAGA CAAAGTAGTG AATCTTCCTC AACAACCATT GAATCCTAAG ATCTCTCACG TCTCAGGATA TATCAACGTG AATCAAGAAA ATACACGATC ACTCTTCTTT TGGTTCTTCG AAGCCTTGTC TGAATCTCCT TCAACAAGAC CTCTAGTTCT CTGGCTCAAC GGAGGTCCTG GATGTTCATC TATTGGATAT GGAGCAGCAT CTGAATTAGG ACCTTTTCGT GTTGTTGAAA ATGGGACAAG CCTTAGTTTC AATCAATATT CTTGGGTCCA AGAAGCGAAT ATATTGTTTT TAGAATCACC AGTTGGAGTA GGGTTTTCGT ACACGAACTC ATCTTCCGAT TTGGACAACC TCAACGACGC TTTCGTTGCG GAAGATGCAT ACAACTTTAT GGTTGCTTGG TTTGCAAGGT ATCCCCAATA TAAGTCTCGT GATTTCTTCA TAGCTGGTGA AAGCTATGCC GGTCACTACG CACCTCAGCT AGCCGAGCTT ATATACGATC GGAACAAAGT TAAGCCAAAG GACTCCTTCA TTAATCTCAA AGGCTTCATC GTGGGAAATC CGTTGACGGA TGATGAATAC GATAACAAAG GGATTCTAGA ATACGCATGG AGCCATGCAG TGATCTCTGA TGATCTCTAC GACTCCGCAA AACGTAACTG CGACTTCAAG TCTTCGAATT GGTCAGAGCC CTGCAACGTT GCCATGAACA CAGTGTTCAC AAAATACAAA GAGATTGATA TTTATAACAT ATATGCTCCC AAGTGCATAG CTAATAGCTC ATCAGGAGCT TCCTACTTAG ATTCCGGAGT CAATCATAAG TCTCCGGCGG TCAAAGACTG GTTCAAGAGA GTGAGATGGT TTGAAGGATA CGATCCTTGT TACTCTAATT ACGCTGAAGA ATATTTCAAT AGGGTCGATG TTCGATCGTC TCTTCATGCC ACTACACGAA ATGTAGCAAG ATGGAAAGTT TGCAATGATT CGATATTGCA AACGTACCAT TTTACAGTCT CCTCAATGTT GCCTACATAT AGTAAGCTCA TCAAAGCTGG CCTCAAGATA TGGGTTTATA GTGGAGATGC CGACGGGAGA GTCCCAGTTA TCGGAAGTCG GTATTGTGTT GAAGCTCTTG GGCTTTCCGT CAAATCCGAA TGGCGTTCTT GGTTCCACAA TCATCAGGTG GGAGGGAGGA TAACAGAGTA CGAAGGAGGG TTAACGTTCG TAACGGTGAG AGGAGCTGGA CACTTGGTTC CTCTCAATAA ACCTGAAGAA GCTCTCGCGC TTTTCCGGTC CTTCCTTAAC GGCCAAGAAC TTCCGTCACG GCCCTAG 
Length1437
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6895307.. 6899216
Download Sequence
A.thaliana
AGI-codeAT3G17180.1
Descriptionserine carboxypeptidase-like 33
TAIR curator summary
Alias[scpl33][serine carboxypeptidase-like 33]
Gene coexpression
MR
MR Locus Description
19.4679 Ahg329886 Glycosyl hydrolase superfamily protein
34.9571 Ahg354029
46.3141 Ahg929930
57.9655 Ahg947863 Protein of unknown function (DUF1997)
60.7289 Ahg489265 chitinase A
61.7252 Ahg472780 FAD-binding Berberine family protein
63.6396 Ahg476458 kunitz trypsin inhibitor 1
63.7181 Ahg475091 Flavin-containing monooxygenase family protein
65.4523 Ahg477692 Kunitz family trypsin and protease inhibitor protein
81.4432 Ahg493913
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression