Detail



ID : Ahg479285

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479285|fgenesh2_kg.3__1986__AT3G17980.1
Sequence
AGAAACCAAA GCGACCTGCC CTAATCTTTA GCGATGATAG TTTAAACGGA ACGAAACTTG ACGAAGAAAC TAAAGAGACA CATTTGAATC ATCTTCATAG AAAATAAAAA TATAAAATCG TAGAAAGTGA GAAAGAAAGA ATTAAAAAAG GAAATGACAA CGGCGTGTCC GGCGAGGACA AGCTCACTAA TGGACGATCT CTTGGGCCTC CTTAGAATCC GCATCAAACG TGGCGTCAAT TTAGCCGTCC GTGACATCAG TAGCAGCGAT CCTTACGTCG TCGTCAAAAT GGGCAAACAG AAATTGAAGA CTCGTGTCAT TAACAAAGAT GTAAATCCAG AATGGAATGA AGATTTGACT CTCTCCGTCA CAGACTCCAA TCTTACCGTC CTCTTGACGG TGTACGATCA CGACATGTTT AGCAAAGACG ATAAGATGGG TGATGCTGAG TTCGAGATAA AGCCGTATAT TGAGGCTTTG AGGATGCAGC TTGATGGACT TCCTAGTGGA ACCATTGTGA CCACGGTTAA GCCAAGTCGT CGCAACTGTC TTGCCGAGGA GTCACGTGTC ACATGGGTCG ACGGCAAGCT CGTCCAGGAT CTCGTTCTCA GATTGCGACA TGTGGAATGC GGAGAGGTCG AGGCTCAACT TCAATGGATT GATCTCCCTG GCTCCAAGGG TCTATGAATC TTTTTTCTTT TTTTCTTATT CACCGTTACT TTGAGTTGTT TTCTTTCAAA TTGAACTAAA CCAAGTAACA GCATGGAAAA AAAAACAAGT ATTTCAATCT TGAAGGATAT AGCTAATGAA CTATAAACGC GTATTAATCC ATGGGAATAT AAGGATTAAG AACATTGAGG GAAGTTTTGT TCCCATATGG TGATCGAGTC CAAGTCGAGT GAGTCATGGT GGGCATGTAA ATGCGGTGTA TTGTTGATGT GTATATTTGG GCTAGCTATG CCTTAAAGAA GGC 
Length973
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7228932.. 7230184
Download Sequence
A.thaliana
AGI-codeAT3G17980.1
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
TAIR curator summary
Alias[AtC2][AtGAP1][C2][Arabidopsis thaliana C2 domain][homolog of OsGAP1][C2 domain]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg897444 receptor protein kinase-related
10.198 Ahg472247 Protein of unknown function (DUF677)
10.6771 Ahg331780 C2H2-like zinc finger protein
13.4164 Ahg495632 gamete expressed protein 1
16.4317 Ahg887545
22.1359 Ahg945942
24.5357 Ahg345260 Protein of Unknown Function (DUF239)
26.7582 Ahg916063 kinesin 2
30.7246 Ahg343076
30.9193 Ahg479716 Domain of unknown function (DUF26)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression