Detail



ID : Ahg495632

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495632|fgenesh2_kg.8__1448__AT5G55490.1
Sequence
GTTCTGTCTC TTTTGTTTGT TCGTAGGTGA TCAATCACAA ATCTCCTCAA CAAGAAGAAG ATCAAAAAAC CGATTAAATG GATCGTTTGA GCAGAAAATT TCTTATGTTT CTATTGATCG TACTTTTAGA TTCTCCATTA ACATGCCACA GTTGGGGATG GTTCTCTTCT TCCTCTTCTT CCTCAGCAAA AGATACATAC TCTTCTTCTT TCTCTCGGTC TTACAAATCC AACCCGGACT TCTCCATGGA AGTTTTCAGT GATCAGAAGG CGGTTCGAGT CCTTAAAGAC GCTAAAAACA AACTTGATGG TCCAAACAGT TGCTGGCAAA ATGCTTATAG TTACCTCTTC ACTGGCTGCA AAGAAACGAT TGCTACAGAA GAAAAGAGAA AGAGATTTGC TTGGTATTTG AGTGATTGCT TCATCAAAGA CTCGGGAAGA ACTGCTTTTC CAACCTGTAA AGATGAATCA ACAATGATGA GTTGCCTCAA GAAGCTGGAT GATCATGAGC ATAAGATCTA TCTCGATTTC TTGCTTGAAA CCAACACCAT CTGCCAACAA TTACAGAGTT ATGCATTCAA GCATGAGATA GAGAGGCTTG TGAATGAACT CAAGAGTACA GCTCAGAATA CAGAAGATAA ATTGGATATC TTGGAGAGTA AATCTGATTC TTTAATACAG ACCTCGAGCA TGATTCATGA TTCTTTAGGT TCACTAGATG TCCGGGTTCA AAACGTGGCT CATGTGGCAA ACACCTTAGA AACTAGTGTG AGTGGACTGT CTCAACAAAC TGTAGAAATC TCTCAAGAAC AAAAGAACAT TGCAGAATCA CAGCTTGCGC TAATGGACGG TCAAGTGAAG ATGAAAGAAA CGTTGAAAGA TGGAATGGAG ATGTTCAGCG ATGCGTATAC TAACATCCAA GAAGGAGTAG ATAAGTTGAA AAGCGATACT AAGCAGATTG AGGTGGAAAT AAGTGTACTT GGAAATAACC TATCAACCAA AATGGTAGAT TTGCAGAGTA CAACCGAAGA CATCGGAATT AAGGCTGGTA GTTCGTTGGA AAAACAACAG AAGCTTTTAG ACGGGCAATC TGTGGCTCTT GACGGTATTC AGTTTCTTAC TCGGTTTCAG TCTGAGGCAC TGCAAGAGAG TAGGAGTACC TTGAAACGTT TGACGGAATT TAGTCAGGAG CAACAGGAAG ATCTTGCAAA GCGGCAAGAA AAGCTTCAGG AGGTTCATGA TCACCTGTTT GAAAATTCAA AATCAATGTT AGAAGCTCAG GAAGCGTTTG AGGCGAAACA AGCAAACATG TTTGTAGCTT TGGATAAGCT GTTTGCTCTG CACAATGCGA TGCTTCTCGA GTCCCGAGTG ATAAAAGCCT TCGTCATCTA CTTCTTGTCA ATCTTTGTCA TCTACATGTT TACAAGTACA AAACAAACTT ATATCATAAG GCCAAGGCTT TACATTGGTT TGTGCGTTAC TCTGGCATTA GAAGTGGCAA GTTTGCGATA CGTGAATGAT ACAGAACGCC AAGCATGGAT TATAAACCTA ATCAGGTCTT TATTTGCTCT TCTTGCTTCA GCTCAGCTTC TTCATGCTGC TTTTTCATAC AGGGACTATG AAGTACTAAA CCATCAAATC TTGTTAAGAT TAGTTGATAA GGTTAATGGC ATGCAAAGCA ATAAAGATCT CTCGTACGAT GAAGATACAG AGAGCGAGGT AGATTGGACA TCTTGGGTTG ATACAGATTT AACAGATGAT GATGACAATC TTGGAGATCC TGATTACAGA ATTCCACTAG TGATCAAGGA CAATCCGGTT ACCACTTCAT CAATGACTAG AAGATTGTAT AATTTCAGTC CACGATAGCC AGCAAATCTT TCACTCAAGT TGAAACTACA TTAGTTTTAT TATTACATTA GGGAAACTTT ACATTGTTCC CAGCCAGTGG ATCAAAACTA TAATTATATG GTATAGTTTT T 
Length1981
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16023027.. 16025503
Download Sequence
A.thaliana
AGI-codeAT5G55490.1
Descriptiongamete expressed protein 1
TAIR curator summaryEncodes a transmembrane domain containing protein that is expressed in pollen germ cells.
Alias[ATGEX1][GEX1][GAMETE EXPRESSED PROTEIN 1][gamete expressed protein 1]
Gene coexpression
MR
MR Locus Description
2 Ahg926320 Protein of unknown function (DUF1163)
7.74597 Ahg924298 Uncharacterized protein family (UPF0016)
13.4164 Ahg479285 Calcium-dependent lipid-binding (CaLB domain) family protein
15.8745 Ahg483500 UDP-glycosyltransferase 74 F1
29.2404 Ahg341017 ENTH/VHS/GAT family protein
30.5941 Ahg478788 LOB domain-containing protein 22
35.4965 Ahg895660
38.9872 Ahg907643 Actin-binding FH2 (formin homology 2) family protein
42 Ahg919014
46.4758 Ahg937043 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression