Detail



ID : Ahg479290

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479290|fgenesh2_kg.3__1991__AT3G18030.1
Sequence
TCGACCAGAT CAATTTTTCG GTTAGGGTTC CTCGCCGAAC CATTCGGTGG ATCTCTGAAG TTGTGAAGCA GCTATGGAGA ATGGGAAAAG AGACAGACAA GAGATGGAAG TGAATACCAC ACCGAGAAAG CCTCGTGTAC TACTTGCTGC AAGTGGAAGT GTCGCTGCTA TCAAATTCGG CAATCTCTGC CATTGTTTCA CCGAATGGGC AGAAGTGAGA GCCGTCGTTT CGAAATCATC TCTTCATTTC CTCGATAAAC TCTCTCTCCC ACAAGAAGTG ACTCTGTATA CTGATGAAGA TGAATGGTCA AGCTGGAACA AGATCGGTGA TCCTGTCCTT CACATCGAGC TTAGACGTTG GGCTGATGTT TTAGTCATTG CTCCTTTGTC TGCTAACACT CTAGGCAAGA TTGCTGGTGG GCTTTGTGAT AATCTTCTGA CTTGCATTAT ACGAGCTTGG GACTATAGCA AACCACTGTT TGTTGCACCA GCGATGAATA CTTTGATGTG GAACAATCCT TTCACTGAAA GGCATCTTTT GTCGCTTGAT GAACTGGGAA TCACACTTAT TCCTCCTATC AAGAAGAGAT TGGCCTGTGG AGACTATGGT AATGGCGCTA TGGCTGAGCC CTCTCTTATC TATTCCACTG TCAGACTCTT CTGGGAGTCT CAGGCTCATC AGCAAAGCGG TGGAACTAGT TAAACCATGA TGCATTTTGT GGAAATCATC TGCTTTTAGA TAATAGATTT TTATCAATCT GTATGCTTTT CTTGTACATC TTTAAATGGC TGTCTGGATT CATGTGTCTG GAGAACCATT TGCACTAGCT CCACTCTGTT GCTGTAGAAA TGTTTATGTT TCCTTTCCTC GCTCTTAAAT GTTGTCTTTC AATTCTGCTT ATAGCTCACT GAACTTTTG 
Length919
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7247749.. 7248741
Download Sequence
A.thaliana
AGI-codeAT3G18030.1
DescriptionHAL3-like protein A
TAIR curator summaryflavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).
Alias[ATHAL3][ATHAL3A][HAL3][HAL3A][ARABIDOPSIS THALIANA HAL3-LIKE PROTEIN A][HALOTOLERANCE DETERMINANT 3][HAL3-like protein A]
Gene coexpression
MR
MR Locus Description
12 Ahg327739 RING-H2 finger B1A
13.8564 Ahg491593
30.7409 Ahg945271 vacuolar protein sorting 26B
33.0757 Ahg493198 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
48.0625 Ahg488891 Domain of unknown function (DUF1767)
59.5483 Ahg473046 dormancy-associated protein-like 1
61.7252 Ahg943226 cysteine-rich RLK (RECEPTOR-like protein kinase) 40
62.3538 Ahg483326 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
76.6812 Ahg471074 Cysteine proteinases superfamily protein
77.666 Ahg897242 Protein of unknown function (DUF626)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression